| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0633 |
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| Symbol | |
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| ID | 3676246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 711876 |
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| End bp | 713876 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637712184 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_317252 |
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| Protein GI | 75674831 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.300424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGTCT GCTGCGTTAA AATACCAGCG TGCGTTCGCC GCTTCCGAAC ATGTCAAATT
GGAAATGTCG CAGTGACCGA TTTCAGTAGC ACCCCTCTCC TTGACACTAT CCGCACGCCC
GCCGACCTGC GCAAGCTCAA GGTGGAGCAG GTCCGGCAGG TGGCGGACGA GTTGCGCCTT
GAGACCATCG ACGCGGTGTC TGTGACGGGG GGGCATTTCG GCGCAGGTCT GGGCGTGGTC
GAGCTAACCA CGGCGATCCA CTACATCTTC GATACCCCGC GTGACCGGCT CATCTGGGAT
GTCGGCCATC AGGCCTATCC GCACAAGATC CTGACCGGCC GGCGCGACCG CATCCGCACG
CTACGCACCG GCGGCGGCCT GTCCGGATTC ACCAAGCGCA CCGAAAGCGA CTACGACCCG
TTCGGCGCCG CGCATTCCTC GACCTCGATC TCGGCCAGCC TCGGCATGGC GGTGGCGCGA
GATCTCTCCG GCGGCAACAA CAACGTCATC GCCGTGATCG GCGACGGCGC GATGTCCGCG
GGCATGGCGT ATGAGGCGAT GAACAATGCC GGCGCCATGA ACTCGCGGCT GATCGTCATT
CTCAACGACA ACGACATGTC GATCGCGCCG CCGGTCGGCG CGATGTCCGC CTATCTGTCC
AGGCTCTATT CCGGCAAAAC CTACCGCTCG CTGCGCGAAG CCGCCAAGCA ACTCGGCAAG
CACCTGCCGA AAATGATCGC CGACCGCGCC GAGCGCGTCG AGGAATATTC ACGCGGCTTC
ATGACCAACA GCGGCACGCT GTTCGAGGAA CTCGGCTTCT ATTATGTCGG CCCGATCGAC
GGCCACAACC TCGACCACCT GCTGCCGGTG CTGAAGAACG TCCGCGATAT GGAGAACGGC
CCGATCCTGG TTCACGTGGT GACCCAGAAG GGCAAGGGCT ATCCGCCCGC CGAGGCCGCC
GCCGACAAAT ATCACGCGGT GGTCAAGTTC GACATCTCGA CCGGCGCGCA GTCCAAATCC
AAGCCCAACG CGCCTTCTTA TCAGAACGTG TTCGGCGCAA GCCTCGTCAA GGAAGCGGAG
AAGGACGACA AGATCGTCGC CATCACCGCG GCGATGCCGT CCGGCACCGG CGTCGACATC
TTCAACAACG CGTTCCCGGA ACGCACCTTC GATGTCGGCA TCGCCGAGCA ACATGCGGTG
ACCTTCGCCG CCGGTCTCGC CACCGAGGGC TTCAAGCCGT TCTGCGCGAT CTATTCGACA
TTCCTGCAGC GCGGTTACGA TCAGGTGGTG CACGACGTGG CGATCCAGTC GCTCCCGGTG
CGCTTCGCCA TCGACCGCGC CGGCCTCGTC GGCGCCGACG GCGCGACACA TGCCGGCTCG
TTCGACAACG CTTTTCTCGG CTGTCTGCCG AACATGGTCA TCATGGCGGC GGCCGATGAG
GCCGAACTGG TGCACATGGT GGCGACGCAG GTCGCGATCA ACGACCGCCC CAGCGCGGTA
CGCTATCCCC GCGGCGAAGG CCGCGGCGTG GAAATGCCGG AAGTCGGCGT TCCGCTTCCG
ATCGGCAAGG GCCGCATCGT CCGTCAGGGC AGCAAGATCG CGCTGCTATC CTTCGGCACC
CGCCTCGCCG AATGCGAAAA GGCGGCCGAC GAGCTTGCCG CGCATGGCCT GTCCACCACC
ATCGCCGACG CCCGCTTCAT GAAGCCGCTC GACGTCGATC TGGCTTTGAA GCTCGCGCGC
GAGCACGACG TGCTGATCAC GATCGAGGAA GGCTCGATCG GCGGATTCGG CTCCCACGTC
ATGCAGACGC TGATGGACAA CGGCGCGCTG GACGGCGGCC TGGTGCGGGT GCGCTCGATG
ATCCTGCCGG ACGAGTTTCT CGACCACGAC ACCCCCACCG CGATGTACGC GCGCGCCGGG
CTGGACGCCA AGGGCATCGT CGCCAAGGTA TTCGAGGCGC TCGGCAAGGA CGTCAACACC
GAGACCGTCA AGCTGGCGTG A
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| Protein sequence | MNVCCVKIPA CVRRFRTCQI GNVAVTDFSS TPLLDTIRTP ADLRKLKVEQ VRQVADELRL
ETIDAVSVTG GHFGAGLGVV ELTTAIHYIF DTPRDRLIWD VGHQAYPHKI LTGRRDRIRT
LRTGGGLSGF TKRTESDYDP FGAAHSSTSI SASLGMAVAR DLSGGNNNVI AVIGDGAMSA
GMAYEAMNNA GAMNSRLIVI LNDNDMSIAP PVGAMSAYLS RLYSGKTYRS LREAAKQLGK
HLPKMIADRA ERVEEYSRGF MTNSGTLFEE LGFYYVGPID GHNLDHLLPV LKNVRDMENG
PILVHVVTQK GKGYPPAEAA ADKYHAVVKF DISTGAQSKS KPNAPSYQNV FGASLVKEAE
KDDKIVAITA AMPSGTGVDI FNNAFPERTF DVGIAEQHAV TFAAGLATEG FKPFCAIYST
FLQRGYDQVV HDVAIQSLPV RFAIDRAGLV GADGATHAGS FDNAFLGCLP NMVIMAAADE
AELVHMVATQ VAINDRPSAV RYPRGEGRGV EMPEVGVPLP IGKGRIVRQG SKIALLSFGT
RLAECEKAAD ELAAHGLSTT IADARFMKPL DVDLALKLAR EHDVLITIEE GSIGGFGSHV
MQTLMDNGAL DGGLVRVRSM ILPDEFLDHD TPTAMYARAG LDAKGIVAKV FEALGKDVNT
ETVKLA
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