Gene Nwi_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0618 
Symbol 
ID3676047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp698789 
End bp699670 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID637712169 
Productextensin-like protein 
Protein accessionYP_317237 
Protein GI75674816 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.568145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGC CATCGCTCCG AGCATTCCGG CTATCACAGG GCCTGGCGCG TGCTGGCGGT 
ACCGATCTGG TGCGGCTCGA GGCCGTCGTG CTGCCGGATC GGACGCGTGT TCCGGTCAAG
CCGGCCGCCA CGCTGCGCTG TACGATGGCT TCGGCGATCG CAGACTGGGT TCGAGCCGAT
ATAGCGCCGC TGGCGGAAAG GCTCGGAAGC CGGGTCAGCG AACTCGACAA TTTCGATTCG
TTCGAGTGCA GAGGACGCAA TCGCGTTGCC GGAGCGAAGC TCTCAGAGCA CGGGCACGCC
AATGCGCTGG ACGTTCGTTC AGTCAGGATG TCCAACGGCC GGACGATTAC CCTAACCGAC
CGCAGCGTCC CGCGCGAGCT GCGCGAAAAG CTGCTGAACT CGGTCTGCGC GCGGTTTACG
ACCGTCCTCG GGCCGGGTTC GGACGGCTAC CACGAGGATC ATATTCATCT CGATCTGGCC
GGACGCCGTA ACGGCTACCG GATATGCCAA TGGAAGATCG ACGATCCGAT GCCCAGGGTT
GCGCCGTTGC TTCCGCCCGA GCGCCCCGCG AAAACCTCGC TGCGCGAACC GGCGGAAGAA
AAGAATAAAA AGGAGAAGGC GTCGGAAGGG GTCCCCGAGC GTGCGGCGGC GTCTGGCGTC
GCTTCCCAGG CTTCGGATGA TCCGCCCCAA CTCCCGGCTG CGGTGCCGAT ACCGCAAAAG
CGACCGCTTT CCCGCACGGA ACCAGGCAAG GTCGCGGAGG ATGCGAAGCC GTCGCCGTCC
GTTTCGAGGT CATCGACGAG GCTTTCAGCT ACCCGTTCGG CGAAGCGAAA ACACAGACCG
CGCCTCGATC TGCCACCGTT CCTCAGGCCG CTGTTCAACT GA
 
Protein sequence
MRWPSLRAFR LSQGLARAGG TDLVRLEAVV LPDRTRVPVK PAATLRCTMA SAIADWVRAD 
IAPLAERLGS RVSELDNFDS FECRGRNRVA GAKLSEHGHA NALDVRSVRM SNGRTITLTD
RSVPRELREK LLNSVCARFT TVLGPGSDGY HEDHIHLDLA GRRNGYRICQ WKIDDPMPRV
APLLPPERPA KTSLREPAEE KNKKEKASEG VPERAAASGV ASQASDDPPQ LPAAVPIPQK
RPLSRTEPGK VAEDAKPSPS VSRSSTRLSA TRSAKRKHRP RLDLPPFLRP LFN