| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0599 |
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| Symbol | fliF |
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| ID | 3676266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 677626 |
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| End bp | 679251 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637712149 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_317218 |
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| Protein GI | 75674797 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGGTC TGCTGGCATT TCTGAAAGGC CTGGGAGCAT CCCGGCTGAT GGCGATGGTC
GCGGTCACCG CCGTGCTGAT CGGTTTCTTC GCGTTCGTCA TCATGCGCGT GACGACGCCG
CAGATGACGA CTCTCTTCAC CGATCTCAGC GTCGAGGACT CCTCCGGCAT CATCAAGGAC
CTCGAACGCC AGGCCATTCC CTTCGAGCTT CGTAACGACG GCGCCGTGAT CATGGTGCCG
AAGGACAAGG TGACGCGGCT GCGGATGAAG CTCGCCGAGG CGGGCCTGCC CAAGGGCGGC
GGCGTCGGCT ATGAGATTTT CGACAAGTCG GATGCGCTCG GCACCACCAG CTTCGTCCAG
AACATCAATC GGCTGCGCGC GCTGGAAGGC GAACTCGCGC GCACCATCCG CGCCATCGAC
CGCGTTCAGG ACGCCCGCGT CCATCTGGTG CTGCCCGAGC GGCCGCTCTT CACGCGCGAA
GCGCCCCAGC CTTCGGCTTC GATCGTCCTG CGCGTCCGGG GCGGCCTCGA ACCGCAGCAG
ATTCGCGCCA TCCGCCATCT CGTCGCCTCC GCCGTCAACG GACTGAAGCC GCAGCGGGTC
TCCATCGTGG ACGAAACCGG CCAGTTGCTT GCCGACGGCT CGGCGACCGA TGCCGACGGC
GTGTCCGGAG ACGAGCGACG CGCCGCATTC GAAAAGCGCA TGCGCAGTCA GGTCGAGGCG
ATCGTATCGT CGGTGGTCGG AAACGGCCGC GCCCGCGTCC AGCTCTCCGC CGACTTCGAT
TACAACAAGA TCACCCAGAC CTCGGACAAG TTCGATCCGG AAGGACGGGT GCTGCGATCC
AGCCAGACCC GCGAGGAATC CTCCCTGACG GCCGACAATA ACGGCCAGGT CACGGTCAAC
AACGAACTGC CCGGTAATCA GCCGTCGGAC AATCCGAACA CCGCGCGCGA CCAGAGCAAG
AAGAGCGAGG AAACCAACAA CTACGAGATT TCCCGGACCA CCAAGACCGA GGTGACCGAA
GCAGGCCGCG TCAACCGCAT TTCGGTCGCC GTTCTCGTCG ACGGCGCCTA TGCCAGGAAC
GACAAAGGCC AGATGGTCTA CGAGGAACGC AGCCAGGAAC AGCTCGACCG CATCGCAACG
CTGGTGCGCT CGGCGATCGG TTTCGATCAG AAGCGCGGCG ACCAGGTCGA GGTCGTCAAC
CTCAAATTCG CCGAGCCGCC CGTTGTCGTG CCGCTCGCCG AGCCGACCGG ATGGCTGGGA
ATGATGACGC TGACGAAGGA CGACGTGATG TATGTCTTCG AGCTCGGGGT CATGGCGCTG
CTTGGCCTCG TGGTGACGTT CATGGTGATC CGCCCGCTGG TCCAGCGCAT CCTGGCCGCC
GAGCCGGCCA CGCCCAGCGC GCAACCGGCC GCCGCGCTCC CGGTTCCGGC CGACGCCAGC
GCTCAACCCA CGGAAACCGG GCAAAATCTC ATCCCCGGCA GCAACGCCAC CGCGCAACTG
ATCGACGTTG CCCAGGTGCA GGGGCAGGTC CATGCGCAGT CGGTGCACCG GGTCGGTGAA
CTGGCGGAGC GCAACCCGGC CGAAACCGCT TCCATCATCC GCCAATGGCT CGCCGAACCC
GCGTAA
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| Protein sequence | MQGLLAFLKG LGASRLMAMV AVTAVLIGFF AFVIMRVTTP QMTTLFTDLS VEDSSGIIKD
LERQAIPFEL RNDGAVIMVP KDKVTRLRMK LAEAGLPKGG GVGYEIFDKS DALGTTSFVQ
NINRLRALEG ELARTIRAID RVQDARVHLV LPERPLFTRE APQPSASIVL RVRGGLEPQQ
IRAIRHLVAS AVNGLKPQRV SIVDETGQLL ADGSATDADG VSGDERRAAF EKRMRSQVEA
IVSSVVGNGR ARVQLSADFD YNKITQTSDK FDPEGRVLRS SQTREESSLT ADNNGQVTVN
NELPGNQPSD NPNTARDQSK KSEETNNYEI SRTTKTEVTE AGRVNRISVA VLVDGAYARN
DKGQMVYEER SQEQLDRIAT LVRSAIGFDQ KRGDQVEVVN LKFAEPPVVV PLAEPTGWLG
MMTLTKDDVM YVFELGVMAL LGLVVTFMVI RPLVQRILAA EPATPSAQPA AALPVPADAS
AQPTETGQNL IPGSNATAQL IDVAQVQGQV HAQSVHRVGE LAERNPAETA SIIRQWLAEP
A
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