Gene Nwi_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0540 
Symbol 
ID3675717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp605461 
End bp606606 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID637712085 
Producthypothetical protein 
Protein accessionYP_317159 
Protein GI75674738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.524708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCC GGCGCGCGGT TGTAGCCTCG CTGGCGGCGA ACCTGTTTCC GCCCATCTTC 
GGCCGAACGA GCTTCGCGGT GAAACCCCGG CCTTTGGTCG GAGCAATCCG CTGGGATGCC
TGGTATTCGC CGGGTTCAGC ACCGACCGAA GCCGTCGAGA ACTCGCTATC GCCCGAGAAG
TATCGCTGGC GAGCGCCATT CTTTGCGAGG GGCTCCGCGC ACGACCCGGC GTCCCTTTCT
TTCCCCCCTA TCACCCCGGA GGAAATGGAC AAGGAGATAC GTCAGGCCGC CTTTGCCGGT
CTCGATTACT GGGCCTTCGT TGCCTACGGA TCACACCATC CGATGTCGAA GGCGCTCTAT
CAGTTCAGAG CGAGCGCGGA GAGTGACAAA CTCGGATACT GCCTGTTTAC CGAACTCGAC
CGGTGGGGGT CGCGCAACAA GCCGACAACC TTGCTTCAAG AGCATATCGG TCTCATGGCG
GACAGGAACT ACCTGCGAGT CTCCGGTGAT CGCCCTTTGT ATTTTCTGGG TTTCATCGCA
CCCGCCTCGA TCGAACGAAA CTGGAAAGGA GTCGCGGGCC TGAGGGAGCA GATCGAAAAA
TTTAGAAGTA TGGCTGCCGT GTCGGGCTTG GCGGATCCCT ACATCGTGCT GGCGGGAGAC
CGGAATTTCC TGATGCGCGA AGCCAGGAAT ATCGGCGGCG ATGCGACCGG ATCATACGCG
CTTACGGTAG GCAACGGCCG GGGATCCTTC TCCGATCTAA CGCGAATTGC TGAGCGAGGC
TGGAATGAAC TCGGCAATGG TCATCTGCCT GTCGTGCCGA CTGTGATGAC GGGATGGGAT
CGACGTCCCC GCATTGAAAA TCCCGTCCCA TGGGAAAAAA AACAACGGCC GGGGGAAGGC
ATAGAGAACT TCTTCGCAGC GCCGACCAAG AAGGAACTCG CCGATCACTT GGCGCGCGCG
CTCGATTGGG TCGGGGCCCG GCCGCAAGGT GAGCAGGCTC CCGTCGTGCT GATCTACGCC
TGGAACGAGA ACGATGAAGG CGGCTGGCTG ATGCCGACGT TGCCGTGCCA GACAGATCGC
CTTGACGCGC TGCGTCAGGT TCTGAAGAAG ACAGCCGCTC CAGTTCGCAA GCCGGAACTC
TGCTAA
 
Protein sequence
MLTRRAVVAS LAANLFPPIF GRTSFAVKPR PLVGAIRWDA WYSPGSAPTE AVENSLSPEK 
YRWRAPFFAR GSAHDPASLS FPPITPEEMD KEIRQAAFAG LDYWAFVAYG SHHPMSKALY
QFRASAESDK LGYCLFTELD RWGSRNKPTT LLQEHIGLMA DRNYLRVSGD RPLYFLGFIA
PASIERNWKG VAGLREQIEK FRSMAAVSGL ADPYIVLAGD RNFLMREARN IGGDATGSYA
LTVGNGRGSF SDLTRIAERG WNELGNGHLP VVPTVMTGWD RRPRIENPVP WEKKQRPGEG
IENFFAAPTK KELADHLARA LDWVGARPQG EQAPVVLIYA WNENDEGGWL MPTLPCQTDR
LDALRQVLKK TAAPVRKPEL C