Gene Nwi_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0533 
Symbol 
ID3674132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp593906 
End bp594985 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID637712078 
Producthemolysin-type calcium-binding region 
Protein accessionYP_317152 
Protein GI75674731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.695548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.505891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTT CCTACCTGAC GAAGACCGAG CTAGGCGAGT TTTTTCATAG TAACGGAAAC 
ATCGAGGCGG GCGTGCGATC GGCGTTGATC GATTCGCTCG AGCAAAGCGG TGTGTTCAAC
GATGACGACA ATAGCGCGAG GGGGTGGCTC CAGTCCGGGC CGTTTCCGGG CGGAGAGGTT
CCGCCTGTCG TCCAGATCCT GGGCGTATCC AACTCGACGA ATGTCGAGAC GAATCCCAAC
CTGAAAGCGA TCGTGCTGGA TGATCACAGC GCCAGGCTGG ACGTGACCGG AGGGGATAAC
GACGTCTTTG TCGCCGCAGG CAAAGGGCAT GACACGATCA ACCTGAATGA TAGCGGCAAC
GATACGGTTT ACGGCGGTAG CGGCAACGAT GTGATCCGGG CGAGCGAAGG CGACAACCTG
CTGTTCGGCG GGGCCGGCAA TGACAGCATT TACGGCGGCG CCGGCAACGA TACGCTGGAC
GGGGGTGCTG GCAATGACCT CCTGGTGTCC GGTGGTGCGC GGGCCGCGGG CGTTGGCGGC
GACGCGCGCA TCGCCAGTGC GGACGACAGC GCCTTCGGCG CCGCTGGCCG CGGGCATCAT
CATGGCGGTG GTCATGGAGA TGATCGTGGA TGGGGTCGCG GGGATGATCA CGGTGGCGGT
CGGGGCGGTG ACCATGGTGG CGGCGTCGGC GAGATAGAGG GACACAGCAC GCTTATAGGC
GGCGCTGGCA ATGACACGCT GGTAGGCATG CAGGGCGATG TACTGCAGGG CGGTGCGGGC
AACGATCAGT TTACGTTGCT GTCAGGTGAT GGGAGCGCCA ACTCCACGCT GTACGGTGGT
GGCGGCGATG ACACCTTCCG GATCGAGGCG CGTAGCGGCA GCGACACCAT CTTCGGCGGC
AACGGTAACG ACACGGCCGA ATTTGTGGGC CGGTCGTTCT TCGATGTCGC CAAGATCGAT
GTCGATGCGA GCACGTCGAC CTACACACTG CACTTCAGCG ATCAACAAAC CGTCGCGGTT
AATGGCGTTG AGGAACTGCA TTTCAGCGAT CAGATCGTCA CCCTGCCGAA GCTCTCATAG
 
Protein sequence
MAVSYLTKTE LGEFFHSNGN IEAGVRSALI DSLEQSGVFN DDDNSARGWL QSGPFPGGEV 
PPVVQILGVS NSTNVETNPN LKAIVLDDHS ARLDVTGGDN DVFVAAGKGH DTINLNDSGN
DTVYGGSGND VIRASEGDNL LFGGAGNDSI YGGAGNDTLD GGAGNDLLVS GGARAAGVGG
DARIASADDS AFGAAGRGHH HGGGHGDDRG WGRGDDHGGG RGGDHGGGVG EIEGHSTLIG
GAGNDTLVGM QGDVLQGGAG NDQFTLLSGD GSANSTLYGG GGDDTFRIEA RSGSDTIFGG
NGNDTAEFVG RSFFDVAKID VDASTSTYTL HFSDQQTVAV NGVEELHFSD QIVTLPKLS