Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0462 |
Symbol | |
ID | 3676297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 518793 |
End bp | 520577 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637712004 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_317081 |
Protein GI | 75674660 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCGCT TCGCCGAACT TCTCGACCGT CTCGCCTATG AGCCCGGCCG CAACAACAAG CTGCGGCTGA TGACGGCCTA TTTTCGCGAG ACGCCGGACC CGGATCGGGG CTACGCACTG TCCGCGCTCA CCGGCGCGTT GTCGTTCAAG TACGCCAAGT CAGGTCTGGT GCGCGACCTG ATCGCCGCGC GCGCCGATCC GGTGCTGTTC GCGTTTTCCT ATGATTATGT CGGCGATCTT TCCGAGACGG TGGCGCTCAT GTGGCCACAA CAGCACCCTC CCGACGCCTC GTCCGTTCTC TCTGCCGCTC GCGGGAGCGG GACTGGGAAG GCAACGGGCA CAGGTCACGT TCGTCATTGG CCTTCTCCGA CTCTTACCGA CGTCGTCACC ACGCTGCGCA CGCTCGGCAA GGCCGAACTG CCGGCGCAAC TTGCGCGCTG GCTCGACCAA CTCGACGAGA CCGGACGCTG GGCGCTCTTG AAACTCGTCA CCGGCGCGAT GCGGATCGGG GTCTCCGCGC GGCTCGCCAA GACCGCCGTG GCCGCGCTTG GGAGCAGGGA TGCGCATGAT GTCGAACTGA TCTGGCCGGG CCTCGCGCCG CCTTATCCCG ATCTGTTCGC CTGGCTTGAG GGCCGCGGCG ACAAGCCGGT CAATCGCGCT CCCGCGCCGT TCCGGCCGGT GATGCTGGCG CACGCGATCG AAGATGCTGA CTTTGCGCGC CTGGATGCCA CCGATTTCAC CGCCGAGTGG AAGTGGGACG GCATCCGGGT GCAGGCGGTG AGGGGCCGCG ATGAGCACGG CAATGTCGAG ACGCGGCTTT ATTCGCGCAC CGGCGAGGAC ATCACGCACA GTTTCCCGGA TCTGCTGCCC TCGTTGCGGC GCGAAGGTTT TGCCGAAGGA TGGCTCAACG ACTCGCGGGA ACCGGTCCGC GGTTTTCGTC CGCGGGCTTT CGCCATCGAT GGCGAACTGC TGGTGGTGCG CGATGGACGG GTGCAGTCGT TCAACGTCCT GCAACAGAGG CTGAACCGCA AGGCGGTGAC GCCCAGGCTG ATGAAGGAGT TCCCCGTTCG CCTGCGCGCC TACGATCTGC TCGCCGACGG CGACAATGAT CTGCGCGAGT TGCCGTTTGA AGACCGGCGG CGGCGGCTTG TTGATTTCAT CGCCGCGCTT GACGACCCGC GTATCGACCT TTCGCCGCAG GTCTCCTTCG CCACATGGAG CGATCTCGCG GCGATCCGCG CCGATCCGGC CGCGGCGGGC GCTGACGCCG AGGCTGTCGA AGGCATCATG TTGAAGCGCC GGGACGCGCC TTATATGCCG GGGCGCCCCA AGGGTCTGTG GTGGAAATGG AAGCGTGATC CGCATGTCAT CGACGCGGTG CTGATGTATG CGCAGCGCGG CCACGGCAGG CGCTCGTCCT ATTACTCCGA CTACACCTTC GGAGTCTGGA CCGCGGGAGA GGAGGGCGAG CGGCTGGTGC CTGTCGGCAA GGCCTATTTC GGCTTCACCG ACGAGGAGCT GCTGCGGATC GACCGTTTCG TCCGCCGCAA CACCACCGAG AGTTTCGGCC CGGTGCGCCA TGTCCTGCAT GAGCCCGATC AGGGGTTGGT GCTGGAAATC GCCTTTGAGG GCTTGCAGCG TTCGGCCCGG CACAAGTCGG GGGTGGCGAT GCGTTTTCCG CGGATCAACC GATTGCGCTG GGACAAGCCA CCGCGCGAGG CGGATCGGCT GGAGACGCTG GAGCGGATGC TGGCTTCCGA AGCCACCAGA TCAAACGGCC GTTGA
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Protein sequence | MNRFAELLDR LAYEPGRNNK LRLMTAYFRE TPDPDRGYAL SALTGALSFK YAKSGLVRDL IAARADPVLF AFSYDYVGDL SETVALMWPQ QHPPDASSVL SAARGSGTGK ATGTGHVRHW PSPTLTDVVT TLRTLGKAEL PAQLARWLDQ LDETGRWALL KLVTGAMRIG VSARLAKTAV AALGSRDAHD VELIWPGLAP PYPDLFAWLE GRGDKPVNRA PAPFRPVMLA HAIEDADFAR LDATDFTAEW KWDGIRVQAV RGRDEHGNVE TRLYSRTGED ITHSFPDLLP SLRREGFAEG WLNDSREPVR GFRPRAFAID GELLVVRDGR VQSFNVLQQR LNRKAVTPRL MKEFPVRLRA YDLLADGDND LRELPFEDRR RRLVDFIAAL DDPRIDLSPQ VSFATWSDLA AIRADPAAAG ADAEAVEGIM LKRRDAPYMP GRPKGLWWKW KRDPHVIDAV LMYAQRGHGR RSSYYSDYTF GVWTAGEEGE RLVPVGKAYF GFTDEELLRI DRFVRRNTTE SFGPVRHVLH EPDQGLVLEI AFEGLQRSAR HKSGVAMRFP RINRLRWDKP PREADRLETL ERMLASEATR SNGR
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