Gene Nwi_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0452 
Symbol 
ID3676693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp508789 
End bp510279 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content65% 
IMG OID637711993 
Productpeptidase M48, Ste24p 
Protein accessionYP_317071 
Protein GI75674650 
COG category[R] General function prediction only 
COG ID[COG4784] Putative Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.498871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA GCCCAGTATG GCGCGGGACA GAAGCGATCC GCCTTTCGGC GGCGCCTGTC 
ATGCTGCTCT GCGCGACGCT CGCCCTCGGC GGATGCGGTG ACATCACCCG GTTCCAGACA
GCCTCTCCAT CATCCGCCAA ATCGGTGAAG CCCGCGCGGG CGGCGGCCCC TACTCCGAAG
TCCGAACACG AGCATAAGCG CATCCTCGCC TCGTATGGCG GCGCCTATGA CGACCCGAAA
CTTGAAGCAC TGATCAACCG GACGGTCGAG CGGCTGGTGG CGGTGTCGGA ACGGCCCGAC
CTCACCTACA AGGTGACGAT CCTCAATTCG GGCGCGGTGA ACGCCTTCGC GCTGCCGACC
GGCCAGCTTT ACGTGACGCG CGGCCTGGTC GCGCTGGCCA ACGATACGTC GGAACTATCC
TCGGTGCTGT CGCACGAAAT GGCGCACGTT CTCGCCAAGC ACGCGACAAT CCGCGAGGAC
CAGGCGCGGC AGGCCGCCCT CGTCAGCCAC GTCGTGACCG AGATGGGAAC CGACCCGGAT
CTGACGGCGT TGGCGCTCGC CAAATCCAAA CTGACGCTGG CGAGCTTTTC GCGTGCCCAG
GAATTCGAGG CGGACGGAAT CGGCGTCGGA ATTTCGGCGC GCGCCCATTT CGATCCTTTT
GGCGCGGCCC GCTTCCTTGC TGCAATGGAG CGCAATGCGG CGCTTAAGGC CGGCAAGCCG
TCGCTGGACC CCCGCTCGCA GGACTTCCTG TCGTCGCATC CCGCAACGCC GGAGCGTGTC
CAGAACGCGC AGGCCAATGC GCGCCAGTAC AGTGCTCCCG CGCAAGGCGA ACGGGACCGC
GAGACCTATC TCAACGCGAT CGACAATATC GTTTACGGCG AGGACCCTAG TGAGGGATTC
GTGCGTGGCC GGCGCTTCCT GCACCCCAAG CTGGGCTTTA CCTTCCAAGC GCCGGAAGCC
TTTACGCTGG ACAACACGGC TCAGGCGGTT ATCGGCATTC GCGAGGGCGG CAGTCAGGCC
ATGCGCTTTG ATGTGGTCCG GGTGCCGGCG GAACAGAAAC TCACCGAGTA CCTCAATTCG
GGGTGGATGG AAAACGTCAA CAAGGCGTCG ACCGAGGAAC TGACCATCAA CGGCTTTCCC
GCGGCATCGG CGGTCGCCAG CGGGGAGGAA TGGCAGTTCC GCGTCTATGC CTTGCGCTTC
GGCAGCGATG TTTACCGCTT CATCTTCGCC GCCCGCCGCA AGACTACGGA AAGCGAACGC
AACGCGCGCG AAACGGTCGC TTCCTTCCGC CGCTTGACGC TGGGCGAGAT TCAGGCCGCG
CGACCACTGC GTATCAAGGT GATCACCGTG CAACCGGGCG ATACCGTGGA ATCACTGTCG
CACCGCATGG CGGGCGTCGA TCATCCGGCC GAGCGCTTTC GCGTCCTCAA CGGCCTCGAC
CCTCGGGCCC AGGTCAAGGT CGGCAACCGG GTCAAGATCG TGGTGGACTG A
 
Protein sequence
MTASPVWRGT EAIRLSAAPV MLLCATLALG GCGDITRFQT ASPSSAKSVK PARAAAPTPK 
SEHEHKRILA SYGGAYDDPK LEALINRTVE RLVAVSERPD LTYKVTILNS GAVNAFALPT
GQLYVTRGLV ALANDTSELS SVLSHEMAHV LAKHATIRED QARQAALVSH VVTEMGTDPD
LTALALAKSK LTLASFSRAQ EFEADGIGVG ISARAHFDPF GAARFLAAME RNAALKAGKP
SLDPRSQDFL SSHPATPERV QNAQANARQY SAPAQGERDR ETYLNAIDNI VYGEDPSEGF
VRGRRFLHPK LGFTFQAPEA FTLDNTAQAV IGIREGGSQA MRFDVVRVPA EQKLTEYLNS
GWMENVNKAS TEELTINGFP AASAVASGEE WQFRVYALRF GSDVYRFIFA ARRKTTESER
NARETVASFR RLTLGEIQAA RPLRIKVITV QPGDTVESLS HRMAGVDHPA ERFRVLNGLD
PRAQVKVGNR VKIVVD