Gene Nwi_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0430 
Symbol 
ID3676604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp484989 
End bp486521 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content64% 
IMG OID637711970 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_317049 
Protein GI75674628 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GCGCCGCGGA AATTTCGGCG ATCCTGAAGG ATCAGATCAA GAATTTCGGC 
AAGGAAGCCG AAGTTTCGGA AGTCGGACAG GTGCTGTCCG TCGGCGACGG TATCGCCCGC
GTCTATGGCC TTGACAACAT CCAGGCCGGC GAGATGGTCG AGTTCGAGAA CGGTACGCGC
GGCATGGCGC TGAACCTCGA AACCGACAAC GTCGGTATCG TGATTTTCGG CGCCGACCGC
GAGATCAAGG AAGGCCAGAC CGTCAAGCGC ACCCGCGCCA TCGTCGACGC GCCGGTCGGC
AAGGGCCTGC TCGGCCGCGT GGTCGACGCG TTGGGCAATC CGATCGACGG CAAGGGGCCG
ATCCAGGGCG CCGAGCGCAA GCGCGTTGAC GTCAAGGCGC CCGGCATCAT TCCGCGCAAG
TCGGTGCATG AGCCGATGGC GACCGGCCTC AAGGCCATCG ACGCCCTGAT CCCGATCGGC
CGCGGGCAGC GCGAATTGAT CATCGGCGAC CGCCAGACCG GCAAAACCGC GATCGCGCTC
GACACCATTC TCAATCAGAA GCCGCTCAAC GTCGCCGGCG CCCCGGAGAG CCAGAAGCTC
TATTGCGTCT ATGTCGCGGT CGGCCAGAAG CGCTCCACCG TGGCGCAGTT CGTCAAGGTG
CTCGAGGAGC AGGGCGCGCT GGAATATTCG ATCGTGGTCG CCGCGACCGC GTCCGATCCG
GCCCCGATGC AGTACCTAGC GCCCTTCACC GGCTGCACCA TGGGCGAATA CTTCCGCGAC
AACGCCATGC ACGCCGTCAT CATTTATGAC GACCTTTCCA AGCAGGCCGT CGCCTATCGT
CAGATGTCGC TTCTGCTGCG TCGCCCGCCG GGCCGCGAGG CCTATCCGGG CGACGTGTTC
TACTTGCATT CCCGCCTTCT GGAGCGCGCC GCCAAGCTGA ATGACAGCCA GGGCAACGGC
TCGCTGACCG CGCTGCCGGT GATCGAGACC CAGGCCAACG ACGTGTCGGC CTACATTCCG
ACCAACGTGA TTTCGATCAC CGACGGCCAG ATCTTCCTCG AAACCGACCT GTTCTTCCAG
GGCATCCGCC CCGCGGTGAA CGTCGGCCTT TCGGTGTCGC GCGTCGGCTC CTCGGCGCAG
ACCAAGGCGA TGAAGAAGGT CGCCGGCAAG ATCAAGGGCG AACTCGCGCA GTACCGCGAA
ATGGCGGCCT TCGCGCAGTT CGGCTCCGAT CTCGACGCCT CGACCCAGCG ACTGCTCAAC
CGCGGTTCGC GCCTGACCGA GCTTCTCAAG CAGCCGCAGT TCTCGCCGCT GAAGATGGAA
GAGCAGGTGG TGGTGATCTG GGCCGGCACC AATGGCTATC TTGATCCGCT GCCGCTCGGC
AAGGTGCGTG CGTTCGAGGA TGGGCTGTTG TCGCTGTTGC GCGGCCAACA TGCCGACATC
CTTAACACCA TCCGCGACAC CCGTGATCTC AGCGACGAGA CGGCGGGCAA GCTCAAGAGC
ATCGTCGAAG GTTACGCCAA GACGTTTGCG TAA
 
Protein sequence
MDIRAAEISA ILKDQIKNFG KEAEVSEVGQ VLSVGDGIAR VYGLDNIQAG EMVEFENGTR 
GMALNLETDN VGIVIFGADR EIKEGQTVKR TRAIVDAPVG KGLLGRVVDA LGNPIDGKGP
IQGAERKRVD VKAPGIIPRK SVHEPMATGL KAIDALIPIG RGQRELIIGD RQTGKTAIAL
DTILNQKPLN VAGAPESQKL YCVYVAVGQK RSTVAQFVKV LEEQGALEYS IVVAATASDP
APMQYLAPFT GCTMGEYFRD NAMHAVIIYD DLSKQAVAYR QMSLLLRRPP GREAYPGDVF
YLHSRLLERA AKLNDSQGNG SLTALPVIET QANDVSAYIP TNVISITDGQ IFLETDLFFQ
GIRPAVNVGL SVSRVGSSAQ TKAMKKVAGK IKGELAQYRE MAAFAQFGSD LDASTQRLLN
RGSRLTELLK QPQFSPLKME EQVVVIWAGT NGYLDPLPLG KVRAFEDGLL SLLRGQHADI
LNTIRDTRDL SDETAGKLKS IVEGYAKTFA