Gene Nwi_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0401 
Symbol 
ID3676986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp447999 
End bp448697 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content60% 
IMG OID637711941 
Productheat shock protein DnaJ 
Protein accessionYP_317020 
Protein GI75674599 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.101457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.337808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGTC AAGACTTGAA GCCTGGAGCA TTGCGGTGTC AAAGACAGAT CATGCCGATA 
GACACGTCGA AATTCTTCGA TAGCATCCGC ATCAAGCCAA GGGCCGGTGC GAAGCAGCCG
CGTATGCGCG AGCGCGAAGA AGTGATCGCC TGCGAGTGGC CGGACTGTCA GAGCAGGGGA
CCGCACCGCG CACCGAAAGG CCGCGGCAAC GAAGGCGGGT ATTTTCATTT TTGCCTCGAC
CACGTCCGGG CCTACAATCA GTCCTATAAT TTTTTCCAGG GCATGAATGC GGAAGCGGTC
GCGCGCTATC AGAAGGATGC GCTGACCGGC CATCGCCCGA CCTGGAAGAT GGGCGCGAAC
GGCGCCAAGG GCAAAGGCAG GGCTGACGCC ATCGACGCCG AGGGCGTCGC TGATCCCTTC
AGCGTGTTCG GCGAACTCAA CGGCCGTGGA AAATGGCGTT CCGGCCCGCA GTTCGAATCC
AAACCCGAGA CGCGCAAGAT CTTCAATGCG GAGCGCAAGG CGCTGCAGGT GTTGGGACTC
GGCGCCGACG CCACGCTCGA AACCGTCAAG GCGAAATACA AGATGCTGGT CAAGCAGCAT
CACCCCGATG CCAACGGCGG TGACCGGTCG ACGGAAGATC GCCTGATCGA GATCATCAAG
GCGTATAATT ACCTGAAGAC GGTCGTGCGC GGCGCGTGA
 
Protein sequence
MRCQDLKPGA LRCQRQIMPI DTSKFFDSIR IKPRAGAKQP RMREREEVIA CEWPDCQSRG 
PHRAPKGRGN EGGYFHFCLD HVRAYNQSYN FFQGMNAEAV ARYQKDALTG HRPTWKMGAN
GAKGKGRADA IDAEGVADPF SVFGELNGRG KWRSGPQFES KPETRKIFNA ERKALQVLGL
GADATLETVK AKYKMLVKQH HPDANGGDRS TEDRLIEIIK AYNYLKTVVR GA