Gene Nwi_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0389 
Symbol 
ID3676974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp433517 
End bp434422 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID637711929 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_317008 
Protein GI75674587 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.271785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.87637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT CATTGCCCGC AACGAAACAC TTTCTGCGCG TTCGCCTGGT CTCGTCCGTT 
CTCGGCGGCT GCCTGGCCGC GGTTCTGCTC GTCGGCACGC CGGTCCACGC GGATGATGCG
AATCCCGTGC TGGCAAAAGT GAACGGCTCC GAGATCCGCC AGAGCGACGT CAATCTCGCC
GCGGAAGAGC TGGGTCCGAG CCTTGCGCAG ATGGATCCGG CGGCCAAGCA GGAGAACGTG
CTGTCGTTCC TGATCGACAT GAAGATCATC GCCAAGGCCG CCGAGGAAAA GAAGGTCGAA
AACAGCGAGG ATTTCAAGAA ACGGCTCGCC TTCGCCCGCG ACCGGCTGCT GATGGACCGG
CTTCTGGCGT CCGAGGGCAA GGCCGCGCTC ACCGACAGCG CCATGAAGAC CGTGTATACG
GACGCCTCCA AGCAGATCAC CAGCGAACAG GAGGTTCATG CCCGCCACAT CCTGGTTCCG
ACCGAGGAGG AAGCCAAGAA GGTCGAGGAG GAACTGAAGA AAGGCGCGGA CTTCGCCGAA
CTCGCCAAGA AGGAATCCAA GGATCCCGGC GCCTCCGACG GCGGCGATCT CGGTTTCTTC
ACAAAGGAGC AGATGGTGCC GGATTTCTCG AAGGTCGCCT TCGCGCTGGA GCCCGGCAAG
ATTTCCGATC CGGTCAAGAC CCAGTTCGGC TGGCATATCA TCAAGGTCGA GGAAAAACGC
GCCCGCAAGG CCCCGGACTT CGATCAGGTC AAGCCACAGA TCGAGCAGTT CGTGACCCGG
AAAGCGCAGG CGGAGTATGT CGCCAAGCTG CGCGAGACGG CCAAGATCGA ACGACTGGAC
AAACCAGCCG ACGACAAGAC GAAATCCGCC AAACCAGCCG ACGACAAAAC GCCGGCGAAG
AAGTAA
 
Protein sequence
MTISLPATKH FLRVRLVSSV LGGCLAAVLL VGTPVHADDA NPVLAKVNGS EIRQSDVNLA 
AEELGPSLAQ MDPAAKQENV LSFLIDMKII AKAAEEKKVE NSEDFKKRLA FARDRLLMDR
LLASEGKAAL TDSAMKTVYT DASKQITSEQ EVHARHILVP TEEEAKKVEE ELKKGADFAE
LAKKESKDPG ASDGGDLGFF TKEQMVPDFS KVAFALEPGK ISDPVKTQFG WHIIKVEEKR
ARKAPDFDQV KPQIEQFVTR KAQAEYVAKL RETAKIERLD KPADDKTKSA KPADDKTPAK
K