Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0297 |
Symbol | |
ID | 3677125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 337465 |
End bp | 338439 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637711837 |
Product | type II secretion system protein |
Protein accession | YP_316916 |
Protein GI | 75674495 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTGC AGACCCTGGC CCTGGCATTC ATGGCCGCGA CCGCGGTGGG CGGCGTCGCG TGGGTTTTCC TGTACCCGGT GCTATCGGGC GAGATGAAAG CTGAGAAGCG CCGGGCGGCG CTGGCGCGGA CATCCCCGGC CATCCGGCAG GTCGACCGAG CCCAACGCTC GCGCCGCGAG CAGATCGAGG AATCGCTGCG GGAGATCGAG CAACGCCAGA AGCGCGACAG AAAGGTTACC CTCAACAACC GCATCGCACA GGCGGGCCTG TCGTGGTCGA AGGAGAAGTT CCTGATCGTT TCCGGCATTC TCGCCCTGGC CAGCTTTGCC GTTCCCATTG TTCTGGGAGC CGGGCCGCTT GCGGCAGCAG GCCTGGCCTT CGCGGCTGGC TTCGGCGTGC CGCGCTGGCT GCTCGGTTTC CTCAAGAAGC GCCGGGAGAC CGCGTTCTTG CGCGCGCTCC CCGATGCGGT GGACGTGATC GTCCGCGGCA TTAAAGCCGG CCTGCCGCTG TTCGAGTCGC TCAAGGTTGT CGCGGCCGAT TCGCCGGAGC CGCTGAAAAG CGAATTCGCG GCGATCATCG AGACCCAGGC CATCGGGATG CCGCTCGGTG AAGCCTGCTC GCGGCTGTAC GAGCGAATGC CGGTTCCCGA AGCGAATTTT TTCGGCATCG TGATCGCGAT CCAGCAGAAA TCCGGGGGCA ATCTTTCGGA AGCTCTCGGC AACCTGTCCA AGGTGCTGAG GGACCGCAAG AAGATGGCGG AGAAGATCAA GGCGGTGTCG ATGGAAGCCA AGGCGTCGGC CGCCATCATC GGCTCGCTCC CGCCGATCGT CATGCTGCTG GTCTATCTAT CCACTCCCGA CTACATCGCG CTGCTGTGGA CCCACCCTAC CGGGCGGCTG ATGCTGGCCG GCTCCGCGCT GTGGATGACG GCCGGCATCC TCGTGATGAA GAAAATGATC AACTTCGACT TCTGA
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Protein sequence | MNLQTLALAF MAATAVGGVA WVFLYPVLSG EMKAEKRRAA LARTSPAIRQ VDRAQRSRRE QIEESLREIE QRQKRDRKVT LNNRIAQAGL SWSKEKFLIV SGILALASFA VPIVLGAGPL AAAGLAFAAG FGVPRWLLGF LKKRRETAFL RALPDAVDVI VRGIKAGLPL FESLKVVAAD SPEPLKSEFA AIIETQAIGM PLGEACSRLY ERMPVPEANF FGIVIAIQQK SGGNLSEALG NLSKVLRDRK KMAEKIKAVS MEAKASAAII GSLPPIVMLL VYLSTPDYIA LLWTHPTGRL MLAGSALWMT AGILVMKKMI NFDF
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