Gene Nwi_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0291 
Symbol 
ID3677119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp330270 
End bp331442 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content61% 
IMG OID637711831 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_316910 
Protein GI75674489 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGA CCACGCCCGT CGAAGCTGGG GCAACATCGC CGCTTGGCGA GGCTGTGCCG 
CCGGCGCGCC ATTCCCTTGG CATGTCGCCG CTCAATCGCC GCCGCTGGCA GAACTTCAAG
GCGAACCGGC GCGGCTACTG GTCGCTCTGG ATATTCCTTA TCCTGTTCGG GCTCTCGTTG
TTCGCGGAAT TGATCGCCAA CGATCGACCG TTTCTGATCA GGTTCGATGG ACATCTCTAT
TTTCCGGCGT TCGTCACTTA TCCGGAAACA GCGTTCGGGG GCGATTTCGA GACCGCCGCC
GATTATCGCG ACCCCTATCT GCAGAAGCTG ATCGCGGACA AGGGAGGCAC CATCGTCTGG
CCACCCATAC GCTATTCCTA CGACACCCAT AACCTCGACC TGCCGACGCC GGCACCCTCG
AAGCCGACCT GGCTTCTGAC CGAAGCCGAA TGCAAGGACG TGGTGCAGCG AAAGAACCTC
TCGGGCTGTC GTGATCTCGA ATACAACTGG CTCGGGACCG ACGATCAGGG TCGCGACGTG
GTGGCGCGGC TGATCTACGG ATTCCGGATT TCAGTCCTGT TCGGGCTGTG CCTGACCATC
GTTTCGTCGG TGATCGGAAT CGCGGCGGGC GGCGTGCAGG GGTATTTCGG CGGCTGGGTC
GATCTCGGCT TCCAGCGCTT CATCGAGGTC TGGACCGCGA TTCCCTCGCT TTATCTGCTC
CTGATCCTGT CGTCGATCCT GGTGCCGGGC TTCTTCGTGC TGCTCGGGAT CCTGCTGCTG
TTCTCGTGGG TGTCGCTGGT CGGCCTGGTG CGCGCCGAAT TCCTGCGTGG ACGCAACTTC
GAATACATTA CCGCGGCGCG GGCGCTCGGC GTGTCCAATG CGACCATCAT GTTCCGCCAC
CTTCTGCCGA ACGCGATGGT CGCGACCATG ACGTTCCTGC CGTTCATCGT GTCGTCGTCG
GTGATGACAT TGACCGCGCT CGATTTCCTT GGCTTCGGAT TGCCGCCGGG TTCGCCCTCG
CTCGGCGAAA TGCTGGCGCA AGGGAAAGCC AACGTGCAGG CGCCATGGCT TGGTTTCACC
GGGTTTTTCT CGCTCGCGAT CATGCTGTCG CTTTTGATCT TCATCGGCGA GGCCGTGCGT
GATGCCTTCG ATCCGCGCAA GACATTCAGG TAA
 
Protein sequence
MTSTTPVEAG ATSPLGEAVP PARHSLGMSP LNRRRWQNFK ANRRGYWSLW IFLILFGLSL 
FAELIANDRP FLIRFDGHLY FPAFVTYPET AFGGDFETAA DYRDPYLQKL IADKGGTIVW
PPIRYSYDTH NLDLPTPAPS KPTWLLTEAE CKDVVQRKNL SGCRDLEYNW LGTDDQGRDV
VARLIYGFRI SVLFGLCLTI VSSVIGIAAG GVQGYFGGWV DLGFQRFIEV WTAIPSLYLL
LILSSILVPG FFVLLGILLL FSWVSLVGLV RAEFLRGRNF EYITAARALG VSNATIMFRH
LLPNAMVATM TFLPFIVSSS VMTLTALDFL GFGLPPGSPS LGEMLAQGKA NVQAPWLGFT
GFFSLAIMLS LLIFIGEAVR DAFDPRKTFR