Gene Nwi_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0172 
Symbol 
ID3676628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp198297 
End bp198989 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID637711710 
Producthypothetical protein 
Protein accessionYP_316792 
Protein GI75674371 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.980945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCCGG TTCAAAATCC CACCTACCAA GCCGGAATTC AGACCGGGCT GGAAGCCAGG 
TTCGCCCGCG CGGCCCGCCA CAGCCGCATG GTGCGGACCC TGCGGATCGC GGTGCCGGCG
GCGGTCGGGC TGGCGATGGC CGGGCTGATC GGCGTCGCGG CCTTCAACCC TTTTCGCACG
CTGGCGAATC TGCCGCTCGA TATGGATAAT CTCGTGGTCT CCGGCACCAA GATTACGATG
GAATCGCCCC GCCTTGCCGG TTTCACGCCC GACAAGCGGC CCTACGAAAT GCAGGCCACG
ACGGCGACGC AGGACGTCGC CGATCCCGAT CATGTCGAGC TGCACACCTT GCGCGCCAAG
GTGCTGATGG AGGACCGCAC GACGGTGACC CTGAATTCCC GCACCGGGGT GTTCAATACG
AAAACGCAAG TGCTCGACCT GCGCAAGGAT ATCCTCATGC TGTCTTCGAC CGGATACGAG
GCGCGGCTGA CCCATGCGAT CGTCGATATG GGCCGGGGCA CCGTTACCTC GGACCAGCCG
GTGGATGTCA AGCTGCTGAA CGGAACGCTG ACCGCCGACA CAATGCAGGT CACCGAAAAG
GGCGACGTGG TGCGATTTGA GAACAATGTC GTCATGCACC TGGTGATGGA TCGTGCTCCC
GCAGATGCCG GCACGGGCGG TGATAAGGAA TGA
 
Protein sequence
MYPVQNPTYQ AGIQTGLEAR FARAARHSRM VRTLRIAVPA AVGLAMAGLI GVAAFNPFRT 
LANLPLDMDN LVVSGTKITM ESPRLAGFTP DKRPYEMQAT TATQDVADPD HVELHTLRAK
VLMEDRTTVT LNSRTGVFNT KTQVLDLRKD ILMLSSTGYE ARLTHAIVDM GRGTVTSDQP
VDVKLLNGTL TADTMQVTEK GDVVRFENNV VMHLVMDRAP ADAGTGGDKE