| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0140 |
|---|
| Symbol | |
|---|
| ID | 3674136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 164942 |
|---|
| End bp | 166048 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637711676 |
|---|
| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
|---|
| Protein accession | YP_316760 |
|---|
| Protein GI | 75674339 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.878428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.626976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCATTCA CGCTTCCGCG CGACGCCAAC GGCATCCTGC CCGACCGCAT GATCGCGGCG
ATGGCGGATG CGGGGCTGAT CCTCCCCGAA TACCCGTTCG TCGAGAGTCA GATCCAGCCG
GCAAGCCTTG ATCTGCGGCT CGGCGCGACC GCCTATCGCG TGCGCGCCAG TTTTCTGCCG
GGGCCGGACG CGACCGTCGC TGAACGCATC GACGAACTGA AGCTGCACGA AATCGACCTT
TCCGACGGCG CGGTGCTGGA GACCAACTGC GTTTACATCG TGCCGTTGCT GGAGAGCCTG
GCCCTTCCGC CCGAGATCGT CGCCGCCGCC AATCCAAAAA GCTCGACAGG CCGTCTCGAC
GTGTTCACAC GCGTCATCGC CGACGGCACC CGGAGTTTCG ACATGATCGG CGCCGGCTAT
CATGGCCCGC TCTATGCCGA GATCAGTCCC AAGACGTTTC CGGTGTTGCT GCGCGAGGGC
TCGCGGCTGT CGCAGGTCCG CTTCCGCTCG GGCGACGCCG TTCTCGACGC CGACGAACTC
GACGCCCTGC ATGCGAGCGA GCGGCTCGTC GATAGCGACG ACACCGATTT CGTCAACGGC
GTGGCGCTTA GCGTCGATCT CTCGGGCGCG CAGGCCCACG GCTTTGTCGG CTATCGCGCC
AAGCGCCATA CCGGCGTCAT CGACATCGAT CGCCGCGGCG GCTATGCGGT TGGCGAGTTC
TGGGAGCCGA TCGCGGCGCG TCCGGACGCC AGCCTGATCC TCGATCCCGG CGAGTTCTAT
ATCCTCGCCT CGAAGGAAGC GGTGCAGGTG CCTCCGGACT ATGCCGCGGA AATGGTGCCG
TTCGATCCTC TGGTCGGCGA ATTCCGTGTG CATTATGCGG GCTTCTTCGA TCCCGGCTTC
GGCTATGCCG GCGCCGGTGG GGAGGGGTCG CGCGCGGTGC TGGAAGTGCG CTCGCGCGAG
GTGCCGTTCA TTCTCGAGCA TGGCCAGATC GTCGGCCGCC TGGTCTATGA GAAGATGCTG
GCGCGGCCCG ACGCGATGTA CGGCCAGCGC ATCGGCTCCA ACTACCAGGC CCAGGGCCTC
AAGCTGTCGA AGCATTTTCG GCTGTAG
|
|---|
| Protein sequence | MSFTLPRDAN GILPDRMIAA MADAGLILPE YPFVESQIQP ASLDLRLGAT AYRVRASFLP
GPDATVAERI DELKLHEIDL SDGAVLETNC VYIVPLLESL ALPPEIVAAA NPKSSTGRLD
VFTRVIADGT RSFDMIGAGY HGPLYAEISP KTFPVLLREG SRLSQVRFRS GDAVLDADEL
DALHASERLV DSDDTDFVNG VALSVDLSGA QAHGFVGYRA KRHTGVIDID RRGGYAVGEF
WEPIAARPDA SLILDPGEFY ILASKEAVQV PPDYAAEMVP FDPLVGEFRV HYAGFFDPGF
GYAGAGGEGS RAVLEVRSRE VPFILEHGQI VGRLVYEKML ARPDAMYGQR IGSNYQAQGL
KLSKHFRL
|
|---|
| |