Gene Nwi_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0016 
Symbol 
ID3676456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp16416 
End bp16988 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content63% 
IMG OID637711551 
Producthypothetical protein 
Protein accessionYP_316636 
Protein GI75674215 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0297149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA TTACGTGCAG GGAACAGCCG GCCCGCGCAA GGCGCGGCGG CGAGAAACAC 
ATCATGATCC GCTCCGCTAC TCCCGTGACT GAAATTCTCG TCGTCGCCGA TTGCTGGCGC
GCAGAGGCGG GTGCCGAGGC CGTCATTCAT CGCGCCATCG CCACCGCCGC CGGGATGGTC
GATAAGGACA CCGGCGATGC CGAGCTTGCG ATCATGCTGA CCGATGACGC CGGAATCCGC
ACGCTCAACG CCAACTGGCG CGGTCTCGAC AAGCCGACCA ATGTCCTGTC GTTCCCGGCG
TTGCAGCCGA CCGGTCCGTG CCTGCCCGAC GATCCGCCGC GTATGCTCGG GGACATTGCG
ATCGCCTATG AAACCCTGCG CCGCGAGGCC GGTGACGAAC GCAAGACCTT CGATCATCAC
CTCAGCCATC TTGCCGTCCA CGGCTTCCTG CATCTGATCG GTTACGACCA CGAGACCGAC
GGGGAAGCCG AGGAAATGGA AAGTCTCGAA CGTCAAATTC TGGCGCAGCT CGGAATCCCT
GATCCCTATG CGCCCCCGGA ACGGATGACC TGA
 
Protein sequence
MPNITCREQP ARARRGGEKH IMIRSATPVT EILVVADCWR AEAGAEAVIH RAIATAAGMV 
DKDTGDAELA IMLTDDAGIR TLNANWRGLD KPTNVLSFPA LQPTGPCLPD DPPRMLGDIA
IAYETLRREA GDERKTFDHH LSHLAVHGFL HLIGYDHETD GEAEEMESLE RQILAQLGIP
DPYAPPERMT