Gene Nther_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2787 
Symbol 
ID6314743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3010558 
End bp3011541 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content40% 
IMG OID642645159 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001918923 
Protein GI188587378 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGTG ACCCTATCTT GAAAGTGGAC AACTTAAAGA CTGTTTTTCA AAATGACAGA 
GGGACAGTGA CTGCAGTTCA GGACGTTTCC TTTCAAATAA ATGCTGGTGA GTCCGTAGCT
ATTGTTGGAG AATCGGGGTG TGGTAAAAGT GTGACAGCAC TTTCAATTAT GGATTTAATT
GATACTGGAG GAAGAGTGGA TTCGGGGAAA ATTAAATATT GTGGAAAAAA CTTAGTTACA
ATGAATCATG AACAAAAAAG ACAGCTGCGT GGTAGAGAGA TAGCTATGAT TTTTCAAGAA
CCCCTTTCGT CATTGAATCC AGTATTGACG GTCGGTCGAC AAATCACTGA GCCCCTTATT
GTTCATCAAA ATTTGAATAA AGATCAAGCC AAAGAGATGG CATTAAAAAT GCTTGAAAGA
GTAAAAATAC CTAGGCCTGA AAAAGTATTT AAACAATATC CCCACTCTCT GAGTGGTGGT
ATGAGGCAAC GTGTGATGAT AGCTATAGCG TTAATCTGTA ATCCAAGATT ACTGGTTTGC
GATGAACCCA CCACTGCTTT AGACGTAACT ATAGAAGCTC AAATTTTAAA GTTGTTAAAA
CAGTTGGGAG AGGAATTCGG TACGAGTATT ATGATGATCA CCCACGATTT GGGAGTGGTG
GCTGAACTCG CTGATAAGGT CATAGTTATG TATGCCGGTC AGGTTGTAGA AGAGTCTGAT
GTATTTTCTC TTTTTAAAAA TCCCATGCAC CCTTATACTA AAGGATTGCT GAACAGTACT
CCCACCATTG ATAGTGGAGA ATTGGCAAGC ATCGAAGGTA CTGTACCAAC ACCGGACAAG
ATGCCAGATG GCTGTCGTTT TCATCCCAGG TGCCCAGAAG CTATGGAAAT TTGTAATGAA
GCTTCTCCAG AAATGGTGGA AAATCAAGGT CACAAAGTTC GCTGTTTTCA ACACCATGAA
GTATGTAAAA AGGTGGCGAT ATAA
 
Protein sequence
MKSDPILKVD NLKTVFQNDR GTVTAVQDVS FQINAGESVA IVGESGCGKS VTALSIMDLI 
DTGGRVDSGK IKYCGKNLVT MNHEQKRQLR GREIAMIFQE PLSSLNPVLT VGRQITEPLI
VHQNLNKDQA KEMALKMLER VKIPRPEKVF KQYPHSLSGG MRQRVMIAIA LICNPRLLVC
DEPTTALDVT IEAQILKLLK QLGEEFGTSI MMITHDLGVV AELADKVIVM YAGQVVEESD
VFSLFKNPMH PYTKGLLNST PTIDSGELAS IEGTVPTPDK MPDGCRFHPR CPEAMEICNE
ASPEMVENQG HKVRCFQHHE VCKKVAI