Gene Nther_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2626 
Symbol 
ID6315101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2821313 
End bp2822716 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content46% 
IMG OID642645004 
Productprotein of unknown function DUF214 
Protein accessionYP_001918769 
Protein GI188587224 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGG CAGATCTGCT CATTTTAGCC AATAAAAATC TTTGGAGACG TAAAGTGCGT 
ACCATATTGA CCTGTATGGG GGTGGTCATT GGGACTGCAT CTATTGTGGT TATGATTTCC
CTGGGAATAG GTCTTCAAGC CAGTATGGAA GAAAGTATGG CACGCTGGGG TGATCTTAAT
ATTATTCAGG TCAATCCAGG TATGCATCAT GATCCGGAAA ATCCCGAAGC TGCAGAAAGC
ACATCTCAAG AAGAAGTGGG GCTTGACGAA GAAGCTGTGG AAAAATTTAA ATCCATGCCG
GGAGTTAGTG CAGTTTCACC CACCTATGAA GTTAGGGGTG AAGCTCAGAT GGGCAGGGAA
GAAGGACATT TTCGCATGGT TGGAGTCGAC GTTGAAACCA TGGAAGAACT GGAGTTCAGC
TTACAAGATG GTCGGCTTCC TCGAGCGGAG GAAAGTTATA CCGTCGTGGC TGGTCCCCAG
GTAATTAATA CTTTTCGCGA TCCCAGGGTA GAGCAAGGAC CTGGAGCCCC TGGTTCAACT
GGTGGCCATG AAGAACGTGA GCCAACTGAA CTATTAGAAG AAAGTGTTCA GGTTACATTC
CACAATCGGG CTGACCGTGA AAGGCAGCAA AGGCACAACT TTTTTGTTGT TGGAATTTTA
GATGACGAGA GTATGCAGAG ATCCTCACAA GTATATGCCT CTTTAGAAGA TATAGATCGG
ATTCGAGACT TTGTTTATGA AGGGATTGAG GATGCCCGGC AGGAAACAGC TGCTATGGGG
GGGCAAGGCG CCGCTCAGCA GCAAAGCAGG CAGCAGCGAG ACCAGGAAAA AGAATATGAT
TCGATAAAAA TTAGAGCCGA CAGTATAGAA AGTGCCCGGG AACTATCAGA TAATTTGCGG
GATATGGGAT ACAATGCTTA TTCCGCTTCA GATGCCCTGG AAGGAGTGGA AAACACCTCA
CGTACTATTC AAGCTATTTT GGGAGGAATT GGAGGAATCA CACTCCTAGT TGCAGCCTTG
AGTATTACCA ATACTATGGT CATGTCAATT TACGAGCGGA CCAAGGAAAT TGGAGTAATA
AAAGTTATTG GGGCTTCTGC TTCTGATATT AGGGCTATGT TCCTTACAGA AGCTTCTCTG
ATAGGTTTTT TTGGTGGAGT GATTGGCCTG GCTGTAAGTT ACGGTGCATC CCATTTGCTA
AATCAGTTTG CCGGAAGATT TGTTGAAGGG GGAATCATGC CTGTTGCCGA CCCGGCTGCT
GAATCAGTGC AGATCTCCAT TATCCCAGTC TGGTTAGCTT TATTTGCTCT AGGGTTTGCA
ATATTAATAG GATTGATTTC CGGCCTTTAT CCGGCCATGA GAGCCATTAA GCTCAGCCCT
ATAGTGGCAA TTCGTAATGA ATAA
 
Protein sequence
MRKADLLILA NKNLWRRKVR TILTCMGVVI GTASIVVMIS LGIGLQASME ESMARWGDLN 
IIQVNPGMHH DPENPEAAES TSQEEVGLDE EAVEKFKSMP GVSAVSPTYE VRGEAQMGRE
EGHFRMVGVD VETMEELEFS LQDGRLPRAE ESYTVVAGPQ VINTFRDPRV EQGPGAPGST
GGHEEREPTE LLEESVQVTF HNRADRERQQ RHNFFVVGIL DDESMQRSSQ VYASLEDIDR
IRDFVYEGIE DARQETAAMG GQGAAQQQSR QQRDQEKEYD SIKIRADSIE SARELSDNLR
DMGYNAYSAS DALEGVENTS RTIQAILGGI GGITLLVAAL SITNTMVMSI YERTKEIGVI
KVIGASASDI RAMFLTEASL IGFFGGVIGL AVSYGASHLL NQFAGRFVEG GIMPVADPAA
ESVQISIIPV WLALFALGFA ILIGLISGLY PAMRAIKLSP IVAIRNE