Gene Nther_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2529 
Symbol 
ID6315452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2722850 
End bp2724106 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content34% 
IMG OID642644912 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_001918677 
Protein GI188587132 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000174279 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGTATAA ATAAAATATG TGTAATGGGA CTCGGGTATA TTGGGCTTCC TACCGCTAGC 
ATGTTAGCTA CTAATGGATT TCAAGTCTTA GGCGTTGACG TTAATCATCG TGTTGTTAAT
ATGATAAATC AGGGAGAAAT ACATATTGAA GAACCAGGAT TAAATACAAT GGTTAATGCT
TCAGTGAAGT CGGGAAACCT GGTAGCTAGT AATAAACCAG AAGAAGCAGA TGCTTTTATT
ATTGCTGTAC CTACTCCTAT AAATGGTGAT AAGACTGTGA ATTTAGATTA CGTTAAAGAT
GCGATGAAAG AAATTATTCC ATATTTACAA AAAGATAATT TAATAGTCTT AGAGTCTACT
GTTCCCCCTA GAACAACAGT AGATGTTTTA CTGCCTTTGC TAGAAGAAAC AGACTTAAAA
GTAGGGGATG ATGTATTTGT TGCTCACTGT CCAGAGAGAG TTCTTCCTGG AAATATATTG
CATGAATTAG TAAATAACAA TAGAATTATA GGTGGGATTA ATAATAAATC ATCTGAAAAA
GCTAAAGAAA TTTATGAGAA AATAGTACAA GGAGAGATTG TATTGACTGA TGCAACTTCT
TCAGAAATGG CTAAACTAAT GGAGAATGTC TACAGAGATG TTAATATAGC TCTTGCTAAT
GAGCTCAGTC AAATTTCTGA TGAACTTGAT ATTGATGCTT TAGAAGTTAT TAAACTTTCT
AATATGCATC CAAGAGTAAA TATTCATCAG CCCGGTCCGG GTGTAGGAGG GCACTGCTTA
CCTGTAGATC CATATTTTAT TACAGAGAAA ACTGATAAAG CGCAGATAAT TAGTTTGAGT
AGAAAGATAA ATAATGAGAT GCCTGATTTT GTAGTGGAAA AAGTAAAAGA GAAATTAAGC
GATCTAACTC AACCAAAAGT TACAGTGTTA GGTGTATCAT ATAAAGGCAA TGTTGATGAT
ACAAGAGAAA CCCCTGCTAG GGACATTATC AATAATCTAC AAGAGATAGC TCAAGTTAAA
ATATATGACC CTCAAGTAAG GAACTTTGAT CATGAATTGG TAAACTTAGA AGAAGCGTTT
AAAGATAGTG ACATAGTGGT TGTATTGGCT GAACATAGTG AATTTAAATT CTTAGCTCCA
AATGAATTAG GGAAACTTAT GAGGACAAAA CAAGTTTTTG ATACTAAAAA CTGCCTGAAT
CACAATTCTT GGGTCGATGG TGGATTTTAT GTTGATGTAC TAGGGAAAAG AATGTAA
 
Protein sequence
MSINKICVMG LGYIGLPTAS MLATNGFQVL GVDVNHRVVN MINQGEIHIE EPGLNTMVNA 
SVKSGNLVAS NKPEEADAFI IAVPTPINGD KTVNLDYVKD AMKEIIPYLQ KDNLIVLEST
VPPRTTVDVL LPLLEETDLK VGDDVFVAHC PERVLPGNIL HELVNNNRII GGINNKSSEK
AKEIYEKIVQ GEIVLTDATS SEMAKLMENV YRDVNIALAN ELSQISDELD IDALEVIKLS
NMHPRVNIHQ PGPGVGGHCL PVDPYFITEK TDKAQIISLS RKINNEMPDF VVEKVKEKLS
DLTQPKVTVL GVSYKGNVDD TRETPARDII NNLQEIAQVK IYDPQVRNFD HELVNLEEAF
KDSDIVVVLA EHSEFKFLAP NELGKLMRTK QVFDTKNCLN HNSWVDGGFY VDVLGKRM