Gene Nther_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2454 
Symbol 
ID6317100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2635882 
End bp2637198 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content40% 
IMG OID642644842 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_001918607 
Protein GI188587062 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.406393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAA AAGAAATTAA ACCGAATGGT TGGGCATTAA TACCCTTATT TGTGTTTTTA 
TTTTTGTATT TAGGTGTAGG ACTGTTTCTG ACTTATTTAG GAGTTGAAAT GGCCTTTTAC
GAATTTCCTG CACCTATTGC AGCATTGATT GGTATTGTAG TAGCAGTATT TATGGCAAGA
GGTACAATTG ATGAACGGAT CAAGACTTTT ATTAACGGGG CCGGTGAAGA AGGTATTGTG
ATTATGTGTA TGATTTATTT GCTGGCCGGT GCCTTTTCAG CAGTAGTAGA AGGTATGGGA
GGCGTTGAAT CTACTGTTAA TCTAGGGCTT ACTATGGTGC CTGCTCGCCT GTTGCTACCT
GGTTTATTCT TGATAAGTGC TTTTATATCC CTGGCCATGG GAACTTCAAT GGGAACTATC
GGTGCAGTTG CGCCAATTGC CGTTGGCTTG GGTCCCGAAA TTGGAGTTTC TATGCCGGTC
ATGATGGGAA TTGTGATTGG TGGTGCCATG TTTGGTGACA ATTTGTCAAT TATATCCGAT
ACAACAATTG CCGCTACTCA GACCCAGGGA GTTAAAATGA AAGATAAGTT TAAAATGAAC
TTTTTGATTG TACTCCCTGC CGCTATTATA TCTTTGATTA TTTTACTATT TGTCGGTGAT
GTTGCTGCTT TAGATGGAGA TTATCCCTTT GAAATTATTA AGGTTTTACC CTATATATTT
GTACTTGTCT TTGCTTTGAT GGGTGTAAAT GTTTTTGTTG TTCTGTTTTT AGGTTTGGTA
TTGGCTGGGC TAATTGGAGT TGTTTACGGA GATTTTACAG CTTTAGAACT GTCTCAAGCC
GCATATCAAG GTTTTACTGA TATGAACGAA GTTTTCTTCT TGTCATTGTT TGCTGGTGGA
CTGGCTGCCA TGATACGAAA AGAAGGTGGA CTGGCCTTTT TGGTCGATCA AATATCAAGG
CGGGTCAAAA CTCGAAAAGG GGCAGAGCTG GGGATTGGTG CTTTATCAGC AGCTGCCGAC
ATTTGTACTG CCAATAACAC TGTTGCAATT ATAATCAGTG GACCTTTGGC GAAGAATATT
GCTTTAGAAA ATGGTGTTGA TCTGCGAAGA AGTGCTAGTA TGCTGGATAT TTTTGCATCA
GTAACCCAGG GAATGCTTCC CTATGGGGCT CAAATCTTGC TGGCAGGTTC ACTTGCTGGA
ATTTCGCCAC TCACAATAAT CCCGAACTTG CACTACAATT TCTTAATGCT CGGTTGTGTG
CTTTTGGCAA TATATTTAGG TATACCTAAT TTGAAACCTT CAGAAGATAG CGCTTAG
 
Protein sequence
MDQKEIKPNG WALIPLFVFL FLYLGVGLFL TYLGVEMAFY EFPAPIAALI GIVVAVFMAR 
GTIDERIKTF INGAGEEGIV IMCMIYLLAG AFSAVVEGMG GVESTVNLGL TMVPARLLLP
GLFLISAFIS LAMGTSMGTI GAVAPIAVGL GPEIGVSMPV MMGIVIGGAM FGDNLSIISD
TTIAATQTQG VKMKDKFKMN FLIVLPAAII SLIILLFVGD VAALDGDYPF EIIKVLPYIF
VLVFALMGVN VFVVLFLGLV LAGLIGVVYG DFTALELSQA AYQGFTDMNE VFFLSLFAGG
LAAMIRKEGG LAFLVDQISR RVKTRKGAEL GIGALSAAAD ICTANNTVAI IISGPLAKNI
ALENGVDLRR SASMLDIFAS VTQGMLPYGA QILLAGSLAG ISPLTIIPNL HYNFLMLGCV
LLAIYLGIPN LKPSEDSA