| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2396 |
|---|
| Symbol | |
|---|
| ID | 6317012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2560119 |
|---|
| End bp | 2561246 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642644784 |
|---|
| Product | succinyl-CoA synthetase, beta subunit |
|---|
| Protein accession | YP_001918549 |
|---|
| Protein GI | 188587004 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000351393 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT ATGAATATAT GGCTAAGAAA TTGATGAATC AATGTGGTAT TTCCGTACCC
AGGGGAGAAG CAGCATTTTC CGCTCAAGAG GTGGAACAAA AATTTACTGG TTTGGACTCT
CCTGCGGTAA TAAAAAGTCA GGTCCTTGTG GGTGGACGTG GCAAGGCAGG GGGGATTAAA
TTTGCGGATA CCCCCCAGGA AGCCAGAAAA GTTAGTAAGG AATTATTTAA TATGCAAATA
AAGGGAGAGC AGGTAACAGG AGTTTTAGTG GAAGAACAGC TAGATATATC CAGTGAACTT
TATCTTAGTA TTACTGTGGA TACGGGAACT AAAAAACCAC TAATTATGGC TTCTACCCAG
GGTGGTGTAG ATATTGAAGA GGTCTCTGAT GATTTGATTG TAAAGCGTCA TATTGAGCCA
GACTGGGGCG TCCTTCCTTA TCTTTGTAGA GAAATTACAG ATCAACTTAA TTTACCAGGG
GAAGCTAGCA AACAAGTTTC TGCCATCATT TCAAAACTCT ATGACACCTT TAAAACTTAC
GACGCAGAAC TGGTTGAAAT CAATCCCTTG GTGATTACTG AGGATAATCG TGTAATAGCA
GCTGATGGAA AAATGACTAT AGATGATGAC GCCATGTACA GACAAGATGA ATTGCCTCGG
GTGTCAGAAA AGACATCCCT AGAACAGCAA GTTGAGAAAA TCGGGCTATC CTTTGTAGAA
CTGGAAGGAG ATATAGCGAT TATGGCTAAT GGCGCTGGAA TGGCCATGGC TACAGTAGAC
GTGATAGAAC AGTACGGTGG GAAAGCTGCC AACTTCCTAG ATGCCGGGGG AGGAGCCAGT
GTAGAACCGA CAAAAAAAGC TCTGGAGTTA CTTCTCAATA CGGATCCCCG GGCTGTAATA
ATTAATATTT TTGGTGGTAT TACCAGATGT GATGATGTGG CCAATGCCCT GGTCCAGGTA
AAACAAGATA TGGGCATTAA AGTACCCTTG GTAATTCGTT TGATAGGGAC TAAAGACGAG
GAAGCTGTCA AAATTTTAGG ACAACACGGT ATTTCCGCCT ATCAAGATAT GGGAGAGGCG
GCCAAAAAAG CTGTTGAATT AGCTGCTGAG GGAGGAGTTG GTGTATAA
|
|---|
| Protein sequence | MKLYEYMAKK LMNQCGISVP RGEAAFSAQE VEQKFTGLDS PAVIKSQVLV GGRGKAGGIK
FADTPQEARK VSKELFNMQI KGEQVTGVLV EEQLDISSEL YLSITVDTGT KKPLIMASTQ
GGVDIEEVSD DLIVKRHIEP DWGVLPYLCR EITDQLNLPG EASKQVSAII SKLYDTFKTY
DAELVEINPL VITEDNRVIA ADGKMTIDDD AMYRQDELPR VSEKTSLEQQ VEKIGLSFVE
LEGDIAIMAN GAGMAMATVD VIEQYGGKAA NFLDAGGGAS VEPTKKALEL LLNTDPRAVI
INIFGGITRC DDVANALVQV KQDMGIKVPL VIRLIGTKDE EAVKILGQHG ISAYQDMGEA
AKKAVELAAE GGVGV
|
|---|
| |