Gene Nther_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2388 
Symbol 
ID6314275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2551271 
End bp2553022 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content44% 
IMG OID642644776 
Productextracellular solute-binding protein family 5 
Protein accessionYP_001918541 
Protein GI188586996 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGGTT ATTGGTGGAC CTTTGTGACT GTGTTAGTCT TAAGTTTTAC CTTAGTGTTT 
ACTGGCTGTG GCCCCGATGA TGCCGATCCT GCCGAAGAAG AACCAGAAGA AGCTCCTGAC
CCCGACAGAA AAGTTGAAGA AATTGTAATC AACACTACCA CTATGGATTA CGACCCGGCT
AGAAATGAAG TCGCCAGGTG GGTAGGAGAT ACTTTTGAAA CTGAACTAGG CGTTGATGTG
GAAGTTCAAC CTAGAGAGTT TACAACTTTA GTAGACTCAG CTCGTCGGGA TCCTGGTGAA
TCTGAATGGC AAGCCATCAC TCTAGGTTGG TCTGGGCGGA TAGAGAGAGC CGACCCTGAC
ATGTTCACTC ACACCTTGTT CCATTCCGAT CAAGCTTACG ACGGTGGAAA CAACTATCAT
AATTATGAAA GTGATGAATA TGACGAGCTA GCAGAACAGG CCAGGATGGC CTTCGATGAA
GATGAAAGAC AGGAACTGGT CTATGAAATG CAAGAAAAAT TAGCTGAAGA TATTCCCATG
ATTGTATTGT ACAACGAGGC TGAACATCAA GCTCAAAACG TGGAACGCTG GGACAATGTA
ATACAAACTC CTGAAGGAAA ATACAGTGAA TGGTTCCCCT ATTACGCTGA ACCATTAACT
GATGATGATC ATTTTAGAAT CGGCTATACC CAGGATTTGG ATACATTTAA CCCACTAGCA
GCTACCACAG TTTTTGAGTG GAAATTACTA CGACTAAATT ACGACAAATT GTTCCGAGTT
GGCCCTGATA TGGAATTGAG GCCCTGGATG GCTGAAGATC ACGAGGTCGT AGACGAACAA
ACCATAGATG TGGAACTTCG GGACGGTTTA GAGTTTCATG ACGGTGAACC TGTTACACCA
AGAGACGTTA AATTTACCTT TGATTACATG ACAGACTGGG GAGTAGGTTA TTTTGCCGGT
TTCTTAGATC CTCTAGACGA AGTGGAACTA CTTGAAGACG AAACAATTCG CTTCCACTTG
GAAGAACCCA ATGCAACCTT CTTGACAAAT ACTTTAACCC AAATTGTCAT CTTACCAAAA
CACATTTGGG GAGACTTAGT TGAACCAGAA GAGGATCATG TTTGGGGAGA AATGATGGAT
GATCCCAGTC AAAGCGAAGG ATTATCCCAC CCCGATGAAT ATGAAAATGA AGAAGCCATC
GGAAGTGGAC CTTATGAACT GGACTACTGG AACCGAGGTG AAGAAATCAG CCTTGTTCGC
AATGAAAATT ACTTTGACCA TCCCGATTAC TATGATGCCG ATGAAATAGA TGTAGAAAGG
ATTTCCTATA TAATTTACGG ACACGAAGAA GGTGTTATGG GCGGCCTTGA ACACGAAGAA
ATTGACCTGG TAGGAGATGC TTACATGTCC GATTACGTGG ATAGAGTTGA AGAAATGGAG
CATGTGGAAT ATTCCGGACA CACATCCATC GGTTTCCACT ATTTATCCTT CGATCTCAGC
GAACCACCTT TTGAAGACCA CGCCTTTAGA GAAGCAGCTG CCCACTTAAT AGATGCCGAA
GAACTACTGG ATATTGTCCA CGGAGGTTAC GGAGAACCCG GTGGTGCAGG TAGAGTAATT
TCACCATCAG TCGAGTTTTG GAGAAATCCC GATGTGCCAG AATACCCCTT TGACCCAGAC
CGAGCAGTAG AAATTTTAGA AGACGCAGGT TATGAATTTT ACGATGGAGA TCTCTATTAT
CCCGAAGACT AA
 
Protein sequence
MKGYWWTFVT VLVLSFTLVF TGCGPDDADP AEEEPEEAPD PDRKVEEIVI NTTTMDYDPA 
RNEVARWVGD TFETELGVDV EVQPREFTTL VDSARRDPGE SEWQAITLGW SGRIERADPD
MFTHTLFHSD QAYDGGNNYH NYESDEYDEL AEQARMAFDE DERQELVYEM QEKLAEDIPM
IVLYNEAEHQ AQNVERWDNV IQTPEGKYSE WFPYYAEPLT DDDHFRIGYT QDLDTFNPLA
ATTVFEWKLL RLNYDKLFRV GPDMELRPWM AEDHEVVDEQ TIDVELRDGL EFHDGEPVTP
RDVKFTFDYM TDWGVGYFAG FLDPLDEVEL LEDETIRFHL EEPNATFLTN TLTQIVILPK
HIWGDLVEPE EDHVWGEMMD DPSQSEGLSH PDEYENEEAI GSGPYELDYW NRGEEISLVR
NENYFDHPDY YDADEIDVER ISYIIYGHEE GVMGGLEHEE IDLVGDAYMS DYVDRVEEME
HVEYSGHTSI GFHYLSFDLS EPPFEDHAFR EAAAHLIDAE ELLDIVHGGY GEPGGAGRVI
SPSVEFWRNP DVPEYPFDPD RAVEILEDAG YEFYDGDLYY PED