Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2388 |
Symbol | |
ID | 6314275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 2551271 |
End bp | 2553022 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642644776 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_001918541 |
Protein GI | 188586996 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGGTT ATTGGTGGAC CTTTGTGACT GTGTTAGTCT TAAGTTTTAC CTTAGTGTTT ACTGGCTGTG GCCCCGATGA TGCCGATCCT GCCGAAGAAG AACCAGAAGA AGCTCCTGAC CCCGACAGAA AAGTTGAAGA AATTGTAATC AACACTACCA CTATGGATTA CGACCCGGCT AGAAATGAAG TCGCCAGGTG GGTAGGAGAT ACTTTTGAAA CTGAACTAGG CGTTGATGTG GAAGTTCAAC CTAGAGAGTT TACAACTTTA GTAGACTCAG CTCGTCGGGA TCCTGGTGAA TCTGAATGGC AAGCCATCAC TCTAGGTTGG TCTGGGCGGA TAGAGAGAGC CGACCCTGAC ATGTTCACTC ACACCTTGTT CCATTCCGAT CAAGCTTACG ACGGTGGAAA CAACTATCAT AATTATGAAA GTGATGAATA TGACGAGCTA GCAGAACAGG CCAGGATGGC CTTCGATGAA GATGAAAGAC AGGAACTGGT CTATGAAATG CAAGAAAAAT TAGCTGAAGA TATTCCCATG ATTGTATTGT ACAACGAGGC TGAACATCAA GCTCAAAACG TGGAACGCTG GGACAATGTA ATACAAACTC CTGAAGGAAA ATACAGTGAA TGGTTCCCCT ATTACGCTGA ACCATTAACT GATGATGATC ATTTTAGAAT CGGCTATACC CAGGATTTGG ATACATTTAA CCCACTAGCA GCTACCACAG TTTTTGAGTG GAAATTACTA CGACTAAATT ACGACAAATT GTTCCGAGTT GGCCCTGATA TGGAATTGAG GCCCTGGATG GCTGAAGATC ACGAGGTCGT AGACGAACAA ACCATAGATG TGGAACTTCG GGACGGTTTA GAGTTTCATG ACGGTGAACC TGTTACACCA AGAGACGTTA AATTTACCTT TGATTACATG ACAGACTGGG GAGTAGGTTA TTTTGCCGGT TTCTTAGATC CTCTAGACGA AGTGGAACTA CTTGAAGACG AAACAATTCG CTTCCACTTG GAAGAACCCA ATGCAACCTT CTTGACAAAT ACTTTAACCC AAATTGTCAT CTTACCAAAA CACATTTGGG GAGACTTAGT TGAACCAGAA GAGGATCATG TTTGGGGAGA AATGATGGAT GATCCCAGTC AAAGCGAAGG ATTATCCCAC CCCGATGAAT ATGAAAATGA AGAAGCCATC GGAAGTGGAC CTTATGAACT GGACTACTGG AACCGAGGTG AAGAAATCAG CCTTGTTCGC AATGAAAATT ACTTTGACCA TCCCGATTAC TATGATGCCG ATGAAATAGA TGTAGAAAGG ATTTCCTATA TAATTTACGG ACACGAAGAA GGTGTTATGG GCGGCCTTGA ACACGAAGAA ATTGACCTGG TAGGAGATGC TTACATGTCC GATTACGTGG ATAGAGTTGA AGAAATGGAG CATGTGGAAT ATTCCGGACA CACATCCATC GGTTTCCACT ATTTATCCTT CGATCTCAGC GAACCACCTT TTGAAGACCA CGCCTTTAGA GAAGCAGCTG CCCACTTAAT AGATGCCGAA GAACTACTGG ATATTGTCCA CGGAGGTTAC GGAGAACCCG GTGGTGCAGG TAGAGTAATT TCACCATCAG TCGAGTTTTG GAGAAATCCC GATGTGCCAG AATACCCCTT TGACCCAGAC CGAGCAGTAG AAATTTTAGA AGACGCAGGT TATGAATTTT ACGATGGAGA TCTCTATTAT CCCGAAGACT AA
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Protein sequence | MKGYWWTFVT VLVLSFTLVF TGCGPDDADP AEEEPEEAPD PDRKVEEIVI NTTTMDYDPA RNEVARWVGD TFETELGVDV EVQPREFTTL VDSARRDPGE SEWQAITLGW SGRIERADPD MFTHTLFHSD QAYDGGNNYH NYESDEYDEL AEQARMAFDE DERQELVYEM QEKLAEDIPM IVLYNEAEHQ AQNVERWDNV IQTPEGKYSE WFPYYAEPLT DDDHFRIGYT QDLDTFNPLA ATTVFEWKLL RLNYDKLFRV GPDMELRPWM AEDHEVVDEQ TIDVELRDGL EFHDGEPVTP RDVKFTFDYM TDWGVGYFAG FLDPLDEVEL LEDETIRFHL EEPNATFLTN TLTQIVILPK HIWGDLVEPE EDHVWGEMMD DPSQSEGLSH PDEYENEEAI GSGPYELDYW NRGEEISLVR NENYFDHPDY YDADEIDVER ISYIIYGHEE GVMGGLEHEE IDLVGDAYMS DYVDRVEEME HVEYSGHTSI GFHYLSFDLS EPPFEDHAFR EAAAHLIDAE ELLDIVHGGY GEPGGAGRVI SPSVEFWRNP DVPEYPFDPD RAVEILEDAG YEFYDGDLYY PED
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