| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2305 |
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| Symbol | |
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| ID | 6314644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2449230 |
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| End bp | 2451035 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642644693 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001918459 |
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| Protein GI | 188586914 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTTTTG TTGCTGTAAA GAGGTGGGGT GTTCCAGTGA CCAAGATTGA TAACAAAGGA
GTACAGCAGA TAGCTGAAAC GATTTCTGAT GTACTTCTTT TGGATGTGAC GATTGTTGAT
TCTGACTTAA TTAGGGTAGC CGGGACTGGC AGCTACAAAA ACAGAATAGG GGAGAGGTTA
CCCCCAGGAT CTGGTTATGA ATTTTCTATT AAATCAAGAC AAGCTACAAC TATTAACAAA
CCTGGTAAAA ATCAAATCTG TTATTCATGT ACAAAAAAAT CGGAGTGTCA AGAAAAAGCC
CATATGTTAT CGCCAATTAA CTTAAATGGA CAGGTAATTG CAATTATAGG AATTACTGCT
TTTACCGAAT CACAAAAACA AGATCTGACT TACGCAGAAG AAAAATATAG AAGCTTTATC
AAAAAAATGT CTGAACTGCT TGCCGATAGT TTTTCCAATG AACAAATCAT ACTGGAAAAG
ACTAAAGCTT ATGCCCAGGT AAGCGCCATT GTCAATTCTG TTTATGAGGG AATTCTGGCA
GTTGATGATT ATAATGAAGT TATTGCTTGT AATGATGCTG TGCGAGATTT ACTGGATATT
AGAGGAGATA TTATTGGTCA AAATGTGGAA AATGTTGTAC CTGAACTACC CTTTGAAGGG
GTAATAACTA CCGGGACAAG TAAACTAGGG CACGAACAGT ACTTTTCTAA AGTAGGGATT
CACTGTTTGG TCAATATGAA ACCTATTAAA ATGAATAATA AAGTTGTAGG TGCAGTAGCT
ACTGTCAGGG ACACTAAAGA GATTGAAAAA CTCGCTTTTA GGGTTAGTGG TAATACAGCG
GGATTTTCAT TCAATGCAAT TATTTCTAAA AATAATAATA TCAAAGAGTT AAAGGAAAAG
GCCAAAAAAG TTAGTCAAAC GGATTCTACA GTACTTATCC GAGGTGAGAG TGGAACAGGC
AAAGAACTTT ATGCCAGGGC AATTCATTCT GCTAGTCCTA GGTGGAAAGG ACCATTTGTT
CCCGTTCACT GCGGGGCTAT ACCGGAAACA TTACTGGAAA GTGAATTATT TGGTTATGAA
TCGGGTGCTT TTACAGGAGC TAAAAAAGGC GGGAAAATAG GTAAGTTTGA ATTGGCTGAA
GGTGGAACGA TTTTTCTAGA TGAGATTGGG GACATGCCGA TACATTTACA GACAAAACTG
CTTAGAGTTA TGCAAGATGG GACTTTTGAA AGGATAGGAA GCCCTGAAAC TATTAAAATA
GACGTGCGGG TTCTTGCCGC TACTCACCAG CCCTTGGAAG AGTTTATTGA AAAAAACAAG
TTTAGAAGAG ATTTATTTTA TAGATTGAAT GTGGTACCTC TTTTTATTCC CGCTCTGAGG
GAACGACGAG AGGATATTTC ACTACTTCTT AATCATTTTC TAAATAAATA TGCCAATAAA
TTAAAACGGG AACAGCCAGC TTTGTCACGG GAATTAATGA GCTTTTTAGA GCAATATAGC
TGGCCTGGGA ATGTGAGAGA ACTGGAAAAT GTAGCGGAAT ATTTTATAAA TATTAATGAG
AAAGGTTATT TAGATTTAGG AGATTTACCC AAAAATATGA AAGATAAGCT ACTAGAAACC
CAGGATTATC AAAAAAATGT TGGAGATGAT GAGATCTTAC CTCTAGAGGA ATTAGAAAAA
AGGAGTTTCG AAAAAGCAGT TAAAATCTAT GGTATCAGTG AACAAGGAAA ACAACTCATG
GCAGGAAAAT TAGGTGTTAG TAGAGCTACA GTTTATCGTA AACTAAAAAA ATACGGCCTG
ATATAA
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| Protein sequence | MIFVAVKRWG VPVTKIDNKG VQQIAETISD VLLLDVTIVD SDLIRVAGTG SYKNRIGERL
PPGSGYEFSI KSRQATTINK PGKNQICYSC TKKSECQEKA HMLSPINLNG QVIAIIGITA
FTESQKQDLT YAEEKYRSFI KKMSELLADS FSNEQIILEK TKAYAQVSAI VNSVYEGILA
VDDYNEVIAC NDAVRDLLDI RGDIIGQNVE NVVPELPFEG VITTGTSKLG HEQYFSKVGI
HCLVNMKPIK MNNKVVGAVA TVRDTKEIEK LAFRVSGNTA GFSFNAIISK NNNIKELKEK
AKKVSQTDST VLIRGESGTG KELYARAIHS ASPRWKGPFV PVHCGAIPET LLESELFGYE
SGAFTGAKKG GKIGKFELAE GGTIFLDEIG DMPIHLQTKL LRVMQDGTFE RIGSPETIKI
DVRVLAATHQ PLEEFIEKNK FRRDLFYRLN VVPLFIPALR ERREDISLLL NHFLNKYANK
LKREQPALSR ELMSFLEQYS WPGNVRELEN VAEYFININE KGYLDLGDLP KNMKDKLLET
QDYQKNVGDD EILPLEELEK RSFEKAVKIY GISEQGKQLM AGKLGVSRAT VYRKLKKYGL
I
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