Gene Nther_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2128 
Symbol 
ID6316129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2248368 
End bp2248976 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content32% 
IMG OID642644516 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001918283 
Protein GI188586738 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.190242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATT CTCAAACAAA CAAGTACCAT AGATTGATAC AAGCTGCTAT AGAAATCATA 
AAGGAACAAG GTTTTGAAAA AACTTCTGTA TCTCAAATAG TTAATCGGGC TGGAGTAGCT
CAAGGGACCT TTTATCTGTA TTTCAAATCA AAAAATGAAC TAGTTCCTGC TATCGCTCAA
ATGATATTAA ATGAACAGTT TCGCCGGTTA AAGTTAAGGT ATCCTGAGAA GAGCCCAAGT
TTAGAAGAAC TTCTAGACGC TATTATCGAT ACTACATTTG AAATTACTAG AGAGTATAAG
GAGTTAATTC TTTTTTGTTA CTCCGGTCTT GCTTACTACT ATTCTTTTGA GAGATGGGAA
GAAATTTACG AACCGTATTA TAAATGGTTA GAAGATAAGA TTTGTGAAAT ACGTAGTTTA
CAAAAAGTCC AACAAGAGAA TAATACTTAT TATTTGGCAA ATTATATAGT GAATTTGGTA
GAACATGGGG CAGAACTATT TTATCTATCA AATGGATTTA ATGAAAATCT TGATGAATCA
AAACAGGAAC TGAAAAAATT TTTAAAGCGA TCGCTGAACC AACGAGGTGA TATTAAATAT
GAAGGATAG
 
Protein sequence
MTHSQTNKYH RLIQAAIEII KEQGFEKTSV SQIVNRAGVA QGTFYLYFKS KNELVPAIAQ 
MILNEQFRRL KLRYPEKSPS LEELLDAIID TTFEITREYK ELILFCYSGL AYYYSFERWE
EIYEPYYKWL EDKICEIRSL QKVQQENNTY YLANYIVNLV EHGAELFYLS NGFNENLDES
KQELKKFLKR SLNQRGDIKY EG