| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2079 |
|---|
| Symbol | |
|---|
| ID | 6316074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2199120 |
|---|
| End bp | 2199758 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642644467 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_001918234 |
|---|
| Protein GI | 188586689 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAC AAGAGGGTGA AAAAATATCT GTTTTAATTG TGGATGATCA TGAAATGGTC
AGATTGGGAC TTCGCAGTTA CCTGGAGACC CAGGAGGATA TTGAAGTTGT AGCGGAAGCT
TGTGATGGAC AAGAAGGTAT TGATTTGGCA AGGGAATACC AACCTCAAGT TATTTTAATG
GATTTAGTTA TGGATGGCAT GGATGGAATC CAGGCTACCA GGGAATTACA GGGAGAAGGA
TTTAAAATTG TTGTTCTTAC AAGTTATGTA GATGATGATA AAGTATTTCC CGCTTTAGAA
GCTGGAGCTT ATAGTTATAT ACTAAAAACT TCTGATGCGG AAGATATTGC CAAATGTATT
CGAAAAGCAA GTGAAGGAAA ACCCAGTTTT GAGGGTCAAG TTACTAAATT AATGATGGAA
CGTAGGGAAA ATGAATCGGC ATATCTTAAC TTAACTAATA GAGAAAAAGA AGTTTTGAGA
TTACTGGGTA AAGGGTTTAC TAATCAGGAA ATAGCCGATG AATTATATAT TGGTATAAAA
ACAGTCAAGA CACATGTAAG CAATATTTTA GATAAATTGG AACTGAAAGA TAGAACTCAG
GCTGCCATTT ATGCAAAAGA TTATGGTTAT ACTAATTAA
|
|---|
| Protein sequence | MYKQEGEKIS VLIVDDHEMV RLGLRSYLET QEDIEVVAEA CDGQEGIDLA REYQPQVILM
DLVMDGMDGI QATRELQGEG FKIVVLTSYV DDDKVFPALE AGAYSYILKT SDAEDIAKCI
RKASEGKPSF EGQVTKLMME RRENESAYLN LTNREKEVLR LLGKGFTNQE IADELYIGIK
TVKTHVSNIL DKLELKDRTQ AAIYAKDYGY TN
|
|---|
| |