Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2010 |
Symbol | |
ID | 6314477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2118239 |
End bp | 2120368 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642644398 |
Product | ribonuclease R |
Protein accession | YP_001918165 |
Protein GI | 188586620 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000115062 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTTA GAGACAAAAT TATCAACTTC ATGAAAGCAG ATGCTTATAA ACCTATGACC TTTGAAGAGT TAAAAGATGA ATTTAAAATT AACAAACCTA GACAGGTCAA ACGGTTTAAA AAGATATTGA AAAAGATGAC TCGAGATGGA CAGATTGTGA AAACTAGATA TGGCTATTAT GGTTTACCGG AGCGTATGAA TTTGCAAATA GGAACAATCC AGGGTCATCC TAAAGGATAT GCTTTTCTTT TACCAGATAA GCCTGGTAGT CCTGATGTGT TTTTAAGCCC TAAAAGTCTA AATGGAGCCC TACACAATGA CAAAGTATTA GTAAGAATAC ATAAAGAGGA GATGCTGAAC CAAAAACCTG AAGGAGAAGT AGTACGAATT ATTTCCCGGG GAATGTCCGA AGTAGTTGGT ACATTTGATA AAAGTGATCG ATTTGGTTTT GTGGTTCCAG ATGATGATAG ATTCTTCAGA GATGTGTTTA TAAATAAAGC AGATGCCAAT GGTGCTAAAA ATGGCCAAAA GGTTGTTGCT CAAATCACAG GTTGGCCCGA TACTCCGGCC AAAAACCCTG AAGGTGAGAT CATTAAAGTA ATTGGAAATC CTAGTGATCC TGGTGTGGAT ATTGAGACTA TTATAAATAA ATACGGTCTG TCAGAAGATT ATCCGCCAAA AGTCAAAGAA CAATTAGAGG AAGTTCCTAA TGAGATTAGC CCGAAAGATT ACGAAGGAAG AGAGTTGATT CAAGGGTTAC CAACTGTAAC CATTGATGGT AGCGATGCTA AGGACTTGGA TGATGCAGTC TCTTTAGAGA AACTCGATAA TGGAAATATG GAACTAGGTG TACATATAGC TGATGTCAGT TACTATGTCA GAGAAGGAAC TCCACTAGAT AAAGAAGCTC GTCAAAGGGG TACTAGTGTT TATTTGGTGG ATCGTGTTTT ACCTATGTTA CCACCAAAGT TATCAAATAA TATTTGTAGT CTAAACCCAG GAGTAGAACG CTTGACTATG AGCGCTTTTG TAGAACTAAC AGAAGAAGGA GACATTGCAA ATTATAGATT GACTCCTAGT GTAATCAAGA GTAACTACCG CTTAACCTAT GAAGAGGTCA ATGAGTTATT TGATGGTAGT AAAGAGATAG AAGAAAAATA TCCAGATGTA GCCTGGATGT TATTTGAAAT GAAAACAATC TCTGAAAAAC TTAGGGAACG AAGATTTGAT GAAGGGGCTA TAGACTTTGA ATTTGATGAA CCAGTTGTGG TATTAGATGA TCAAGGGAAA CCAGAAAGTG TTGAAAAACG AGCAAGAGGA TCCGCAGAAA AGTTGATAGA AGAATTTATG CTACTAGCTA ATAGAGTTGT AGCCGAACAC CATTATAACC TTGATATGCC TTTTATTTAC AGAGTCCACG AACAGCCTGA TGATGAAAAA GTTTCAACTT TCAGGGAGTT TGCGTCAAAG TTTGGGTATT ATTTGCCTAA ACCGGAAGGG GAAGAAATAT ATCCCATCGA ATTTCAAAAA GTTTTAGAAG AAGCAAAGGA TACTAGAGAG GAACGTGCTA TTAGCACTAT GATGCTCAGG TCAATGAAAC AGGCTAGATA TGCAGCTGAA AGCCTGGGCC ACTTTGGGCT ATCTTTTCAA TATTATACTC ACTTTACTTC ACCTATTAGA AGATATCCCG ACTTAGTAGT TCATAGGATT ATGAGAGAAA TTATTACCAA GAAAGACTTA AAAGAGGCCA GACAAAAGAA ATTACAAAGT AAATTAGAAG AAATAGCCTA TCAATCTTCT TTGAGGGAAC AAGAAGCTAC AGAAGCAGAG AGAGAATCAG TTGATTATAA AATGGCCGAG TATATGGAAC AATTTGTAGG GGATGATTTT CCAGGAATAG TAAGTTCTGT AACTTCCTTT GGTATATTCA TAGAGTTACC AAATTTAGTT GAAGGTCTTG TGCATGTAAG TTCTATGACT GATGATTACT ATTACTTTGA CGAAGAAAAA TTTGCTTTAA TTGGTGAACA GACAAGAAAA ACTTATCGAA TCGGGGATGA AGTTAAAGTT AAAGTGGTTA AAACCTCAAA GGAAGATTGT CAAGTTGACT TTGAACTAGT TGAAGATTAG
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Protein sequence | MILRDKIINF MKADAYKPMT FEELKDEFKI NKPRQVKRFK KILKKMTRDG QIVKTRYGYY GLPERMNLQI GTIQGHPKGY AFLLPDKPGS PDVFLSPKSL NGALHNDKVL VRIHKEEMLN QKPEGEVVRI ISRGMSEVVG TFDKSDRFGF VVPDDDRFFR DVFINKADAN GAKNGQKVVA QITGWPDTPA KNPEGEIIKV IGNPSDPGVD IETIINKYGL SEDYPPKVKE QLEEVPNEIS PKDYEGRELI QGLPTVTIDG SDAKDLDDAV SLEKLDNGNM ELGVHIADVS YYVREGTPLD KEARQRGTSV YLVDRVLPML PPKLSNNICS LNPGVERLTM SAFVELTEEG DIANYRLTPS VIKSNYRLTY EEVNELFDGS KEIEEKYPDV AWMLFEMKTI SEKLRERRFD EGAIDFEFDE PVVVLDDQGK PESVEKRARG SAEKLIEEFM LLANRVVAEH HYNLDMPFIY RVHEQPDDEK VSTFREFASK FGYYLPKPEG EEIYPIEFQK VLEEAKDTRE ERAISTMMLR SMKQARYAAE SLGHFGLSFQ YYTHFTSPIR RYPDLVVHRI MREIITKKDL KEARQKKLQS KLEEIAYQSS LREQEATEAE RESVDYKMAE YMEQFVGDDF PGIVSSVTSF GIFIELPNLV EGLVHVSSMT DDYYYFDEEK FALIGEQTRK TYRIGDEVKV KVVKTSKEDC QVDFELVED
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