Gene Nther_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1929 
Symbol 
ID6315830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2029637 
End bp2030416 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content40% 
IMG OID642644311 
ProductABC-type Co2+ transport system permease component-like protein 
Protein accessionYP_001918088 
Protein GI188586543 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.88224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATA TTCATTTGCC TGACGGAATA ATCCCAGTAC CCTGGTGGCT AGCCGGATAT 
TTGGTAGCAG TTTTGATTAT TTATTTATTG TTATCCAGAG TAGATAGTAC AGAAGCACGT
TATCGGATAC CAAAAGCAGC AATGGCAGCT GCCTTTATGC TAGTTGCCAT GTCAGTTCCT
CTAGGATTTT TACCCATACA TTTGAGCATG GCAGTACTGG CTGGAATTTT AGTAGGACCG
GGGATTGGAT TTTTATCAGT TTTTGTTGTT AATTTCATTC TTGCCCTTGT AGGCCATGGA
GGAATTACAA TTGTGGGATT AAACACATTA GTTATTGGTT TAGAAGTATT GGTGGGGGCC
AAGATATTTA GCTATTTATT ATCTAAAACT ACAGTTTGGA AGGCAGCTTT TTTGGCTGTG
ATACCTGCCC TGATTGTATC TTTGGTCTTC ACAGTGAGCT TAGTAGGAGC TACGGTGAGC
TGGGCAGAAG CATTACCCTA TCATCAACAT GATTGTGATC ATGATCATGA CCATGATGAT
CGTTCTCATG CCAATCATAA TGGACATGAT AGTCATGGAC ACTCTGAAGG TAATGGTGAG
GGTATAGAAA CAGCTCTGTC CGAGATACAT ATACTCACTT TAACTGGCTG GACCGCTTTG
TTAGTGATTT TAGCTGTTGG TATTACCTTA GAAGCTATAT TAACTGCCAT TATCGCTAAT
TATATCTATA AGGTCAAACC AGATTTATTA GAGGCAACAA ATAGTTTGCC AGGGAGGTAA
 
Protein sequence
MSHIHLPDGI IPVPWWLAGY LVAVLIIYLL LSRVDSTEAR YRIPKAAMAA AFMLVAMSVP 
LGFLPIHLSM AVLAGILVGP GIGFLSVFVV NFILALVGHG GITIVGLNTL VIGLEVLVGA
KIFSYLLSKT TVWKAAFLAV IPALIVSLVF TVSLVGATVS WAEALPYHQH DCDHDHDHDD
RSHANHNGHD SHGHSEGNGE GIETALSEIH ILTLTGWTAL LVILAVGITL EAILTAIIAN
YIYKVKPDLL EATNSLPGR