Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1911 |
Symbol | |
ID | 6315124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2005534 |
End bp | 2007267 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642644293 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_001918070 |
Protein GI | 188586525 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATT TACAAAATTC AGATTTAGAA ATTATTTTAG ATTCAGTCTA TAACGGAATT ATTGCAATTA ATAAAGAAGG CGAAATTAAT CTCTTTAATA AATCAGCTAG TGAAATTCTA GGGATGTCAA AAGAAGAAGT TTTGGGGTGC GATATCAGAG AAATTATACC AGAAACTGGG CTTTTTAAAG TTTTGGAGAG TAGTCAGACT TTTACAACGG AGAAATTTGT CGTAAATAAA AAAACTTTAC TTACAAATCG CTCTCCCATC TTTAAAGAAG GGGAACTTAT TGGAGCTCTG GGAATTTTTC AAGATATTTC CGAATTGGAA CATATATCTC AAGAACTTGC CAAAACAAAG GCAATAAATG ACGAGTTAAG GGCAATTATC GAATCTTCTT ATGATGGTTT CTGGATAACA GATGGTGAAG GCTATACTAT CATGATAAAT AGCTCTTACG AGCGTATTTC TGGTGCCAAA GCAGAAGAAG TAGTAGGAAG ACATATGAAG GAATTGGAAG AAGAAGGATT TTGCTCGGAA TCTGTAACTT TAAAAGTACT AGAACAAAAA GAACGGGTAA CATTAATGCA CGAACTATTT TCTGGAAAAA AAGTCATGGT TACTGGTAAT CCTGTGTTTG ATAGTGATGG AAATATCACT AAAGTAGTAA CTAATGTCAG AGATATTTCA GAATTACTTG AATTAAAAGA TGAGCTAGAA AAAACTCAAG CTCTTACTCG CCATTATAAA GAAAAGCTAA CTGAAATGGA AGAAAAACTA GGAGAAGGTG AAATTGTAGC AAAAAGCAAG GTGAAAAAAC GGTTGCTAGC TCAAGCTGCT AGAGTTGCAG CTTTTGATTC TACTGTTTTA ATTACAGGAG AAACAGGAGT TGGTAAAGAA ATAGTAGCTA AATACATTCA TCAAAACAGC AATCGCAGCG AGCAACCTTT CATAAAAATT AACTGTGGAG CCATACCCGA AAACTTGCTT GAATCTGAAC TATTTGGACA TGAACCAGGA TCTTTCACAG GTGCATCTAA AAACGGAAAA CCGGGTAAAT TTGAAATTGC CAATGGGGGA ACACTGCTAC TTGATGAGAT AGGTGAATTA TCTAAAGATT TACAAGTTAA GCTATTAAGA GCACTACAAG ATCAAGAGAT AACTAGAATT GGAGGGGTTA AACCCCGACA ATTAGATGTG AAAATCATTG CTTGTACCAA TCGAGATTTA GAAGAAATGG TCTCTCAGGG AGAATTTAGA GAAGACTTGT ACTATCGTTT GAGCGTGGTG CCATTGTATA TACCACCCTT GAGAGAACGC CCAGATGATA TACCTTTTTT AATTCGTCAT TATATTAGAA AATATAATGA AAAATACGGT GTTAATAAGG GATTGTCCTC TTCTGCTTTG GAAGAATTAG TGTCTTATAA TTGGCCGGGG AACGTTCGAG AGTTAGAAAA TATGATAGAG CGACTAGTTA TCATGGTACC TGAAAACTTA ATTGAAACTT CAGATCTCCC ACAACAAATT AAAGAAAGTA ATGTCAAAAT CTTAGAGAAC TTATCTTTAC CTGATGCCGT TAGCAAGCTT GAAAAGCGAA TGCTTCAAAA AGCTATGGAA CAGTCGAACA ATACCAGGGA AGCAGCCCAA ATTTTAGGTG TAGCTCAGTC AACTGTTGTG AGAAAGTTAG ACAAGTATGG ATTGAATTAC AAACATGATG ATCAAGCAAA CTAA
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Protein sequence | MTNLQNSDLE IILDSVYNGI IAINKEGEIN LFNKSASEIL GMSKEEVLGC DIREIIPETG LFKVLESSQT FTTEKFVVNK KTLLTNRSPI FKEGELIGAL GIFQDISELE HISQELAKTK AINDELRAII ESSYDGFWIT DGEGYTIMIN SSYERISGAK AEEVVGRHMK ELEEEGFCSE SVTLKVLEQK ERVTLMHELF SGKKVMVTGN PVFDSDGNIT KVVTNVRDIS ELLELKDELE KTQALTRHYK EKLTEMEEKL GEGEIVAKSK VKKRLLAQAA RVAAFDSTVL ITGETGVGKE IVAKYIHQNS NRSEQPFIKI NCGAIPENLL ESELFGHEPG SFTGASKNGK PGKFEIANGG TLLLDEIGEL SKDLQVKLLR ALQDQEITRI GGVKPRQLDV KIIACTNRDL EEMVSQGEFR EDLYYRLSVV PLYIPPLRER PDDIPFLIRH YIRKYNEKYG VNKGLSSSAL EELVSYNWPG NVRELENMIE RLVIMVPENL IETSDLPQQI KESNVKILEN LSLPDAVSKL EKRMLQKAME QSNNTREAAQ ILGVAQSTVV RKLDKYGLNY KHDDQAN
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