Gene Nther_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1911 
Symbol 
ID6315124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2005534 
End bp2007267 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content35% 
IMG OID642644293 
ProductPAS modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_001918070 
Protein GI188586525 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATT TACAAAATTC AGATTTAGAA ATTATTTTAG ATTCAGTCTA TAACGGAATT 
ATTGCAATTA ATAAAGAAGG CGAAATTAAT CTCTTTAATA AATCAGCTAG TGAAATTCTA
GGGATGTCAA AAGAAGAAGT TTTGGGGTGC GATATCAGAG AAATTATACC AGAAACTGGG
CTTTTTAAAG TTTTGGAGAG TAGTCAGACT TTTACAACGG AGAAATTTGT CGTAAATAAA
AAAACTTTAC TTACAAATCG CTCTCCCATC TTTAAAGAAG GGGAACTTAT TGGAGCTCTG
GGAATTTTTC AAGATATTTC CGAATTGGAA CATATATCTC AAGAACTTGC CAAAACAAAG
GCAATAAATG ACGAGTTAAG GGCAATTATC GAATCTTCTT ATGATGGTTT CTGGATAACA
GATGGTGAAG GCTATACTAT CATGATAAAT AGCTCTTACG AGCGTATTTC TGGTGCCAAA
GCAGAAGAAG TAGTAGGAAG ACATATGAAG GAATTGGAAG AAGAAGGATT TTGCTCGGAA
TCTGTAACTT TAAAAGTACT AGAACAAAAA GAACGGGTAA CATTAATGCA CGAACTATTT
TCTGGAAAAA AAGTCATGGT TACTGGTAAT CCTGTGTTTG ATAGTGATGG AAATATCACT
AAAGTAGTAA CTAATGTCAG AGATATTTCA GAATTACTTG AATTAAAAGA TGAGCTAGAA
AAAACTCAAG CTCTTACTCG CCATTATAAA GAAAAGCTAA CTGAAATGGA AGAAAAACTA
GGAGAAGGTG AAATTGTAGC AAAAAGCAAG GTGAAAAAAC GGTTGCTAGC TCAAGCTGCT
AGAGTTGCAG CTTTTGATTC TACTGTTTTA ATTACAGGAG AAACAGGAGT TGGTAAAGAA
ATAGTAGCTA AATACATTCA TCAAAACAGC AATCGCAGCG AGCAACCTTT CATAAAAATT
AACTGTGGAG CCATACCCGA AAACTTGCTT GAATCTGAAC TATTTGGACA TGAACCAGGA
TCTTTCACAG GTGCATCTAA AAACGGAAAA CCGGGTAAAT TTGAAATTGC CAATGGGGGA
ACACTGCTAC TTGATGAGAT AGGTGAATTA TCTAAAGATT TACAAGTTAA GCTATTAAGA
GCACTACAAG ATCAAGAGAT AACTAGAATT GGAGGGGTTA AACCCCGACA ATTAGATGTG
AAAATCATTG CTTGTACCAA TCGAGATTTA GAAGAAATGG TCTCTCAGGG AGAATTTAGA
GAAGACTTGT ACTATCGTTT GAGCGTGGTG CCATTGTATA TACCACCCTT GAGAGAACGC
CCAGATGATA TACCTTTTTT AATTCGTCAT TATATTAGAA AATATAATGA AAAATACGGT
GTTAATAAGG GATTGTCCTC TTCTGCTTTG GAAGAATTAG TGTCTTATAA TTGGCCGGGG
AACGTTCGAG AGTTAGAAAA TATGATAGAG CGACTAGTTA TCATGGTACC TGAAAACTTA
ATTGAAACTT CAGATCTCCC ACAACAAATT AAAGAAAGTA ATGTCAAAAT CTTAGAGAAC
TTATCTTTAC CTGATGCCGT TAGCAAGCTT GAAAAGCGAA TGCTTCAAAA AGCTATGGAA
CAGTCGAACA ATACCAGGGA AGCAGCCCAA ATTTTAGGTG TAGCTCAGTC AACTGTTGTG
AGAAAGTTAG ACAAGTATGG ATTGAATTAC AAACATGATG ATCAAGCAAA CTAA
 
Protein sequence
MTNLQNSDLE IILDSVYNGI IAINKEGEIN LFNKSASEIL GMSKEEVLGC DIREIIPETG 
LFKVLESSQT FTTEKFVVNK KTLLTNRSPI FKEGELIGAL GIFQDISELE HISQELAKTK
AINDELRAII ESSYDGFWIT DGEGYTIMIN SSYERISGAK AEEVVGRHMK ELEEEGFCSE
SVTLKVLEQK ERVTLMHELF SGKKVMVTGN PVFDSDGNIT KVVTNVRDIS ELLELKDELE
KTQALTRHYK EKLTEMEEKL GEGEIVAKSK VKKRLLAQAA RVAAFDSTVL ITGETGVGKE
IVAKYIHQNS NRSEQPFIKI NCGAIPENLL ESELFGHEPG SFTGASKNGK PGKFEIANGG
TLLLDEIGEL SKDLQVKLLR ALQDQEITRI GGVKPRQLDV KIIACTNRDL EEMVSQGEFR
EDLYYRLSVV PLYIPPLRER PDDIPFLIRH YIRKYNEKYG VNKGLSSSAL EELVSYNWPG
NVRELENMIE RLVIMVPENL IETSDLPQQI KESNVKILEN LSLPDAVSKL EKRMLQKAME
QSNNTREAAQ ILGVAQSTVV RKLDKYGLNY KHDDQAN