Gene Nther_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1890 
Symbol 
ID6314618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1981397 
End bp1982020 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content35% 
IMG OID642644272 
Productsporulation protein YtaF 
Protein accessionYP_001918049 
Protein GI188586504 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID[TIGR02840] putative sporulation protein YtaF 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGC TTTTTCCTTT AGTGGCATTA TCACTGGCTG TGAGTTTAGA CGGATTGGCA 
GCTGGTTTTG CTTATGGATT AAAAAATATT AAGATACCAC TAAGCTCTTT GCTATTATTA
AGTGTAACAT CGGCAATATC CATTGCCATA TCTATGTTTT TTGGCAGGAT AGTTGCCGAT
TTAATTTCAC CAGGTATCGC TGAGATAATG GGGGGCGTTA TATTAGTAGT TTTAGGTTTT
TGGTTCATCA TTCAAAATTT AGCTATTACT TCCAAAGCAT ATCATCAAGA AGAAAATGAT
CAGGCTGATA GAAAAAATAT TATAGAAAAT GTGATGGATG ATCCTATAAA GGCTGATTTA
GATAGTTCTG GTGTGATATC ATTAAAGGAG GCAATTATTT TAGGGATCGC ACTAGCTATG
GATGCATTTA GTGCGGGTTT TGCTGCTTCT TTAATGGGCT TTCACTCAAT AATTACTCCA
TTTTTTGTAG GCTTATGCAA GTTTATTTTT GTTCCTATGG GAGTTAACTT TGGGTTTAAT
CTATTTTCAA AAGTGGATCG GTCTAAAGTC GCTTTTTTAC CAGGCATTAT TTTAATTATG
TTGGGTTTAT TGAACTTTTT CTAA
 
Protein sequence
MPELFPLVAL SLAVSLDGLA AGFAYGLKNI KIPLSSLLLL SVTSAISIAI SMFFGRIVAD 
LISPGIAEIM GGVILVVLGF WFIIQNLAIT SKAYHQEEND QADRKNIIEN VMDDPIKADL
DSSGVISLKE AIILGIALAM DAFSAGFAAS LMGFHSIITP FFVGLCKFIF VPMGVNFGFN
LFSKVDRSKV AFLPGIILIM LGLLNFF