Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1820 |
Symbol | |
ID | 6317002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1893693 |
End bp | 1895120 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642644197 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001917980 |
Protein GI | 188586435 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.102915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTA CCAATAAAGG AATGAAGTGC CGCCAACTTC TGACAGGCGA AAGCTGCAAA GAAGGCTCAC CGCAGAAGAA TAGTGCGGAA CACGAAGGAT ATGCGGGAGT GCACAGTTCT TTAAGGATAA CTGAAAACAA CATCTCCAAT GCAAACTTGT CGAAGGGGAA TTTGCTAGAG GAAATTTTGG ATAGAGACAA CATGAATAAA GCATTCAAGA AAATAAAATC CAACAAAGGC TCTCACGGGA TTGATGGGAT GGGAGTAGAT GAACTTCTAC AATATCTCAA AGAAAACGGG GACCACCTCA GGCAAAGAGT CCTGGACGGT AAATACCGCC CTAATCCCGT CAGAAGGGTA GAGATACCTA AAGAAGATGG GAAGAAAAGA AAATTAGGCA TACCTACAGT GGTAGACAGG GTAATCCAAC AAGCAATAGC CCAAGTACTA TCTCCAATAT ATGAGGAGCA ATTCTCAGAT AACAGCTATG GTTTTCGCCC TGGACGCAGT ACTCATGATG CAATTAAGAA AAGTCAACAA AACATAAATG AAGGATACAA ATATGTAGTA GATATGGACT TGGAGAAATA CTTTGACACA GTAAACCAGA GCAAATTGAT AGAAGTGCTA TCTAAGACAA TAAAAGACGG TCGAGTAATA TCTCTTATCA ACAAATATCT AAGAGCAGGA GTAATGATCA AACACACCTA TAAGGATACA GAAGTTGGCG TGCCCCAGGG CGGGCCTCTT AGCCCTATCC TCAGTAACAT AATGCTCCAC GAATTGGATA AAGAACTTGA GAAAAGGGGG CACGAATTCG TCCGCTATGC GGACGACCTG CTAATCTTTT GTAAAAGCAG AAGAAGTGCC GGACGCACCT TGAAGAACAT ACTACCCTTC ATCGAAAATA AACTATTTCT CAAAGTAAAT AAAGATAAAA CTGTAGTTGC CTATGTAGGA AAGGTAAGAT TTCTTGGGTT TGGCTTTTAC AGACATAAAG GAAAAGCCAG ATTAAGAGTT CATCTTAAAT CAGTTACAAA GATGAGAACG AGAATAAAAG AACTCACATC TAGAAGTTAT GGAATAAGCA ACGAAGCCAG AGCAAAGAAA CTTAGCCGAT ACATTATGGG TTGGGTTAAC TACTTTAAAC CAGCTGATAT GAAGAATCTG TTAATAAATA CTGACAGTTG GATGAGAAGG CGTATTCGCA TGATTTACTG GAAACAATGG AAGAAAGTGA GAACAAAATT TAAAATGCTC AAGTTCTTTG GAGCCAATAA ATACAAAGCA TGGGAATATG CAAACACAAG AAAGGGCTAC TGGAGAATTT CCAATAGCCC CGTCTTATCC AAATCCCTTG GAAATGATGT AATCAAAGGA TTTGGTTTCC TATTCTTTTC GGAATATTAT CGACAAGTTA AAGCGTAA
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Protein sequence | MTVTNKGMKC RQLLTGESCK EGSPQKNSAE HEGYAGVHSS LRITENNISN ANLSKGNLLE EILDRDNMNK AFKKIKSNKG SHGIDGMGVD ELLQYLKENG DHLRQRVLDG KYRPNPVRRV EIPKEDGKKR KLGIPTVVDR VIQQAIAQVL SPIYEEQFSD NSYGFRPGRS THDAIKKSQQ NINEGYKYVV DMDLEKYFDT VNQSKLIEVL SKTIKDGRVI SLINKYLRAG VMIKHTYKDT EVGVPQGGPL SPILSNIMLH ELDKELEKRG HEFVRYADDL LIFCKSRRSA GRTLKNILPF IENKLFLKVN KDKTVVAYVG KVRFLGFGFY RHKGKARLRV HLKSVTKMRT RIKELTSRSY GISNEARAKK LSRYIMGWVN YFKPADMKNL LINTDSWMRR RIRMIYWKQW KKVRTKFKML KFFGANKYKA WEYANTRKGY WRISNSPVLS KSLGNDVIKG FGFLFFSEYY RQVKA
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