| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1811 |
|---|
| Symbol | |
|---|
| ID | 6317136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1879599 |
|---|
| End bp | 1880837 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642644188 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_001917971 |
|---|
| Protein GI | 188586426 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000303004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.076359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCTAC AAAACTATAG TTTAGAACGA CAAATGGAAA TCTTTTCCCA TGGTACCGAA
GAAATAATTT CTAAAGAAGA ATTGCAGAAT AAGATTCAAA AGTCCATTGA TAGTAATGAG
CCATTACGGT TGAAACTAGG TTTGGACCCT TCGGCTCCTG ACATTCATTT GGGGCACACT
GTAGTATTGC GTAAACTAAA ACAGATTCAA GAGATGGGAC ATAATGTTAC CATTATTATT
GGTGACTTTA CTGGTAAAAT TGGTGATCCT ACAGGAAGAA GTGAAACAAG AAAACAAATG
ACAACAGAAG AAATATTGGA AAATGCCGAA ACCTATAAGG AACAAATTTT TAAAATTTTG
TATTCTGATA AAACCGACGT AAGATTTAAC TCAGAATGGC TATCTAACTT GAAGTTTGAA
GATATCATAG AACTATCTAG CAAGGTAACA GTTGCACGAA TGTTAGAAAG AGAAGACTTT
AATTGGAGGT ATAAGAAAAA TCGTCCAATT AGTTTACATG AATTCTTTTA CCCAATTATG
CAGGGTTATG ATTCAGTATT CTTGGATTCC GATGTGGAAT TTGGAGCAAC AGAACAAAAG
TTTAATTTAT TAATGGGAAG GCAACTGCAA AAAGAAAAAG GTAACACACC TCAAATTGCT
CTGATGCTTC CTATATTAGT GGGGACTGAT GGCGAGAAAA AGATGAGCAA AAGTTTGGGT
AATTATATAG GTATAGAAGA AAAACCATAT GATATGTACG GAAAAACTAT GTCTATCCCT
GATGAATTAA TAATTGATTA CTTTACACTA ACTACCGATC TATTACCAGA AGAAGTTGAT
GAAATAGAAA AAGCTTTAAA TGAAGGGAAA AATCCCAGAG ATATAAAAAT GAAGCTTGCC
CGTGAAATTG TAACACTTTA TCATGGGAAA GAAGAGGCCG AAAAGGCTGA ACAGGAATTT
TTGAAGGTGT TTCAACAGCG CCAATTGCCA GAAGATATCC CTGAATACTC TTTAGAAACT
ATTAAAAAAG ATATGACTGA TGAACATAAG ATACCTATTG TAAAACTACT GCAAAACTGT
GAATTGGTAA GCAGTAATAG TGAAGGTCGT AGAATGGTTA AACAAGGAGC AGTAAAACTA
GAAGGTGAAA AAGTGACTGA TAAAAACGCG GAAGTAGAAA TTTCACCAGG TGCTATTATT
CAAGTAGGAA AAAGAAAGTT TGCGAAGATA ACAGAATAA
|
|---|
| Protein sequence | MVLQNYSLER QMEIFSHGTE EIISKEELQN KIQKSIDSNE PLRLKLGLDP SAPDIHLGHT
VVLRKLKQIQ EMGHNVTIII GDFTGKIGDP TGRSETRKQM TTEEILENAE TYKEQIFKIL
YSDKTDVRFN SEWLSNLKFE DIIELSSKVT VARMLEREDF NWRYKKNRPI SLHEFFYPIM
QGYDSVFLDS DVEFGATEQK FNLLMGRQLQ KEKGNTPQIA LMLPILVGTD GEKKMSKSLG
NYIGIEEKPY DMYGKTMSIP DELIIDYFTL TTDLLPEEVD EIEKALNEGK NPRDIKMKLA
REIVTLYHGK EEAEKAEQEF LKVFQQRQLP EDIPEYSLET IKKDMTDEHK IPIVKLLQNC
ELVSSNSEGR RMVKQGAVKL EGEKVTDKNA EVEISPGAII QVGKRKFAKI TE
|
|---|
| |