Gene Nther_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1798 
Symbol 
ID6315261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1863089 
End bp1863574 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content39% 
IMG OID642644172 
ProductHolliday junction endonuclease RuvC 
Protein accessionYP_001917958 
Protein GI188586413 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000582609 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATAA TGGGGTTAGA TCCTGGAATA GCAGCATGTG GGTATGGTAT AATACATGCT 
AAAGGTACTA AATTAGAATG TCTTGCATGC GGTGTTTTAC GTACATATAG TGACGAAAGT
GCTACAAAGC GCCTGGAATC AATTTATCAA GGAGTTTCAA ACTTGATAAG TGAATTTTCA
CCGAATACTG TAGCTGTAGA AAGTTTATTT TTTGCCAAGA ACTCTAAGAC AGCGATGAAG
GTGGGACAAG CCAAAGGGGT ACTAATGCTT GCAGCAGCTC ATAACAATTT AGAAATCTTT
GAGTATACTC CTTTACAAGT TAAACAGGGA GTTTGCGGTT ATGGTTCGGC TTCTAAGGAA
CAAGTGCAAA AAATGGTTAA ACAGATTCTA AGTTTAGATA AGATTCCTAA GCCTGATGAT
GCCGCAGATG CCCTGGCTGT GTCATTGTGC CATTCCCAGG CATACCGCTT GAGAACTAGA
TTATAA
 
Protein sequence
MIIMGLDPGI AACGYGIIHA KGTKLECLAC GVLRTYSDES ATKRLESIYQ GVSNLISEFS 
PNTVAVESLF FAKNSKTAMK VGQAKGVLML AAAHNNLEIF EYTPLQVKQG VCGYGSASKE
QVQKMVKQIL SLDKIPKPDD AADALAVSLC HSQAYRLRTR L