Gene Nther_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1784 
Symbol 
ID6316432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand- 
Start bp1850557 
End bp1851663 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content37% 
IMG OID642644158 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_001917944 
Protein GI188586399 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.397888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0072174 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGATGA GTAATAGAGT TTTAGTGGCA ATGAGCGGTG GGGTAGATAG CTCAGTTGCT 
GCTTTAATGT TAAAAGAACA AGGTTATGAA GTGATCGGTG CTCATATGCG AATTTGGTAC 
AGGGAAGAAG ATGAAGAGCT TTATGAACAA AATGTGAAAG GTTGTTGTTC ACTAGCTGCT 
GTCCACGACG CCAAGAGAGT TGCCGATAAA ATTGGAATAC CTTTTTATGT ATTGAACTTT 
AAAGAACCCT TTTACGATTG GGTTGTAAAG AATTTTATCG ACGAGTATTT ACAGGGACGA 
ACACCAAATC CGTGTATAGC ATGTAATAGA TTTATTAAAT GGGAAGAATT TTTGAAACGC 
GCAATGGCTT TAGAATGCGA TTATATTGCG ACTGGTCATT ATTCAAAAAT TGTATATGAT 
AATCTTAAAA ACAGATATTT ACTGTACCGT GGTAAAGACA AAACCAAAGA TCAGAGTTAT 
ATGTTATCGC AATTAACCCA AGAGCAGCTG GCCCGTACAT TATTTCCCTT AGGTGATTAT 
TACAAAGAAG ATGTAAGAAA TATTGCTGAA CAAAACGAGC TTGGCGTGGC TGATAAACCA 
GATAGCCAAG AAATTTGTTT TGTTCCCAAT AACGATTATG GAGAGTTTCT TCAATCTGTA 
GTACCTGAAC ACATTAATCC TGGTCCTATC CTTGACGCCC AGGGAAATAA ACTGGGTGAG 
CATAAGGGAA TTGCCTTTTA CACCATAGGA CAGAGACGAG GTTTAGGCAT TTCATTAGGT 
AGACCAGTGT ATGTTATTGA TATCGATGCA GATAATAATG CCCTCATAGT TGGGGATAAA 
GAAGAATTAT ACTCGGATGG GTTGATTGCA GAAGAGATCA ATTTAATTCC ATATGAACAA 
ATTGAAAATT CAATTGATAT TGAATGTAAG ATTAGATATA ATTCAAGAAA TGTATCCTCA 
ACACTTCAGC CCTATGGAAA TGATCAACTA TTGGTTAAAT TTAACCAACC CGTAGAGGCA 
GTAACTCCAG GTCAAGGGGT TACTTTTTAC CAAGATGATT TGGTGATTGG CGGTGGTACT 
ATACTTAAGG CGACCACGAA AAAATAG
 
Protein sequence
MMMSNRVLVA MSGGVDSSVA ALMLKEQGYE VIGAHMRIWY REEDEELYEQ NVKGCCSLAA 
VHDAKRVADK IGIPFYVLNF KEPFYDWVVK NFIDEYLQGR TPNPCIACNR FIKWEEFLKR 
AMALECDYIA TGHYSKIVYD NLKNRYLLYR GKDKTKDQSY MLSQLTQEQL ARTLFPLGDY 
YKEDVRNIAE QNELGVADKP DSQEICFVPN NDYGEFLQSV VPEHINPGPI LDAQGNKLGE 
HKGIAFYTIG QRRGLGISLG RPVYVIDIDA DNNALIVGDK EELYSDGLIA EEINLIPYEQ 
IENSIDIECK IRYNSRNVSS TLQPYGNDQL LVKFNQPVEA VTPGQGVTFY QDDLVIGGGT 
ILKATTKK