| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1770 |
|---|
| Symbol | |
|---|
| ID | 6314291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1837025 |
|---|
| End bp | 1837369 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642644144 |
|---|
| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG family |
|---|
| Protein accession | YP_001917930 |
|---|
| Protein GI | 188586385 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.692748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.378996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCTG TGATTGGAGT TATATCATTA ATTGTCAAAG AAATTTCTTT ACTTGTTTCT
TATATTAGCA GCAACTCATT TCCTCAACCT TTATCTGCAG AAGATGAACG CAAATACCTT
AAAAGATTAG AACAAGGTGA TGATAAAGCT AGGGAAGTTT TAATTGAAAG AAATCTACGA
CTAGTAGCCC ATGTTATCAA AAAATTTGAA AACAGTGGTG AAGACCCAGA AGATTTAATT
TCAATTGGTA CAATAGGATT AATCAAAGCG ATTAACACTT ATAATTATAG AAAGGGTACT
AGATTAGCCA CTTACGCTGC ACGATGCATT GAAAATGAGA GTTAA
|
|---|
| Protein sequence | MIPVIGVISL IVKEISLLVS YISSNSFPQP LSAEDERKYL KRLEQGDDKA REVLIERNLR
LVAHVIKKFE NSGEDPEDLI SIGTIGLIKA INTYNYRKGT RLATYAARCI ENES
|
|---|
| |