| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1620 |
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| Symbol | |
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| ID | 6315383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1698903 |
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| End bp | 1699784 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642643996 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001917782 |
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| Protein GI | 188586237 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000349679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000000178449 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAGA AGCTGATTTT AGTTTTAGCA ACAGTATTTT TAGTAGGAAC TATTGGTTTA
GCTGGTTGTG ATGAGCCAGC TCAAGATGGG GACCCAGAAG GAACCCAAGA GGAGATTGAA
TTAGCGTATG TTAACTGGGC ATGTGCTGAA GCCCAAACAC ATGTAGCCCA AGAAGTAATT
GAAAGCGAAT TGGGATACGA TGTGGAGATT ACAATGGCAG ATGCTGGTCC TATTTGGGCT
GACGTAGCTG CAGGAAACCA AGACGGAATG GTTTGTGCTT GGTTACCAGT AACGCAAGGT
GAGTACGATG ATGAATATGA TGGCGATGTA GACAACTTAG GACCAGTTTA TGAAGGAGCT
AGAATTGGCT TAGTTGTTCC TGAATACGTA GATATCGATA GTATTGAAGA GATGGATGAA
ATCGCTGATG AATTAGATAA TGAAATAGTT GGAATCGAAC CCGGTGCAGG AATTATGATT
AATACTGATG AAGCACTTGA AGAGTACGAC AGTCTAGCCG AGTTTGAATT GATTGATAGT
TCCGATGCAG GAATGACTAC ATCTTTAAGT GATGCTGTAG ACAATGAAGA GCCAATTGTT
GTTACAGGAT GGACACCACA TTGGAAATTT GCCGAGTGGG ATCTTGAATT CTTAGAAGAT
CCATTGAATG TATACGGAGA AGAAGAACAT ATAGCTGCAG TTGCAAGACA AGGGCTAGAA
GATGATGCCC CAGATGTTTA CGAATTCCTT GATAACTACA TCATGGATGA CGATCAGATT
GGTGAGGTAA TGGGTATGAT TGAAGAAACT GATGACCCTG AAGCATCTGC CGAAGAATGG
GTTGAAGAGA ATCAAGATGT TGTTCAAGAA TGGTTAGATT AA
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| Protein sequence | MSKKLILVLA TVFLVGTIGL AGCDEPAQDG DPEGTQEEIE LAYVNWACAE AQTHVAQEVI
ESELGYDVEI TMADAGPIWA DVAAGNQDGM VCAWLPVTQG EYDDEYDGDV DNLGPVYEGA
RIGLVVPEYV DIDSIEEMDE IADELDNEIV GIEPGAGIMI NTDEALEEYD SLAEFELIDS
SDAGMTTSLS DAVDNEEPIV VTGWTPHWKF AEWDLEFLED PLNVYGEEEH IAAVARQGLE
DDAPDVYEFL DNYIMDDDQI GEVMGMIEET DDPEASAEEW VEENQDVVQE WLD
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