Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1544 |
Symbol | |
ID | 6316753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1626413 |
End bp | 1627588 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642643919 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001917710 |
Protein GI | 188586165 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000155525 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGAAC AAGCTATCAT CGAAAAAGTA AGAATCATTG AAGTCAATAT GCCTTTTACA AATCATATTC AGGTGGGAGA AAGCTCTAAT AAACTTCGAA AATCATTAAT CATTGAGTTA CACTCAGAAG GTATTATTGG CTATGGAGAG TCTGCGCCTT ACGGCGAACC ATTCTATTCA GGAGAGACCA TTTCTACAGT AAAGCCTATC CTCAAAGAAA ACATTTTACC TAAAATAGTA GGAAAAGAAA TCAGTTCAAT TGAACAATTA AATCAATTAA TCAACACCCA GATAAAAGGT AATAACTTTG CCAAGGCCGG GGTAGAAACG GCCTATTGGG ATTTAATAGC TAAGAAAAGA AATATACCAT TAAAACAACT CATTCACGAA AAATTAATGG AAATCGGGGT GAATGACCCT TCTTTAAATA ATACCAATTA TATTTTAAGT GGTGCTGCAA TGGGTATTCC CCCGGGAGAA AAAGAAGACA ATTTAGTAGA ACAAGTAAAA AGTGCTTTGG AAGAAGGTTA TCAAAAAATT AAAATAAAAG TGTCTCCAGG ATTTGATATC AATGCCATAG AAAAAGTTTT GAAAGTTATA CCTGATGATA TAAATTTTTG GATGGATGCT AGCGCTTCAT ATAACATAAA AAATCATTTA CCGATATTAA AACAAATTGA CTCTTACAAT ATTGATTTTT TAGAACAGCC TTTAGCACAT GACGATATTT TAGAGCATAG CCAGTTAAGC CAAGAAGTGA CTACTCCCAT CTGTTTAGAT GAATCTTTAT ATTCTGCAAA GATAGCGGAA AATTCTCTTG GTCTCGGTTT TAACCAAATT TGGAACATTA AAATCCAACG CATCGGTGGG CTATTAGAGG CGCTTAAGAT TTATAAGTTA GCATCTGAAA ATAACGTCAG TGTGTGGGGC GGTACTATGC CTGAAACTGG TATTGGAGCT ATTTTTATGT TAGCTCTTGG AACTTATTCA AACTTTACTT ATCCTTCAGA TGTTGCAGAT AGCACGAAAT GGTATGGTAA TAATAACGAT CTAAAGGATT TAAAAATGAC CGGGGAGGGG AAAATCTTCT ACTCCGATGA GATAGGAATT GGTGAAATCA ATCATTATAA TTATAGAAAA TATGGACATT TAGTTCATGA AGTAAATGGG TATTAA
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Protein sequence | MKEQAIIEKV RIIEVNMPFT NHIQVGESSN KLRKSLIIEL HSEGIIGYGE SAPYGEPFYS GETISTVKPI LKENILPKIV GKEISSIEQL NQLINTQIKG NNFAKAGVET AYWDLIAKKR NIPLKQLIHE KLMEIGVNDP SLNNTNYILS GAAMGIPPGE KEDNLVEQVK SALEEGYQKI KIKVSPGFDI NAIEKVLKVI PDDINFWMDA SASYNIKNHL PILKQIDSYN IDFLEQPLAH DDILEHSQLS QEVTTPICLD ESLYSAKIAE NSLGLGFNQI WNIKIQRIGG LLEALKIYKL ASENNVSVWG GTMPETGIGA IFMLALGTYS NFTYPSDVAD STKWYGNNND LKDLKMTGEG KIFYSDEIGI GEINHYNYRK YGHLVHEVNG Y
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