Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1523 |
Symbol | |
ID | 6314747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1601694 |
End bp | 1603829 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642643900 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_001917691 |
Protein GI | 188586146 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.723855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000000000155978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGCGAGA CATTTTATTT ATTGTCTGAA AGAATGCAAA AGAAAATATG GGAAATGGGT TGGGATGAAT TCACTCCTGT TCAAGATAAA ACCATACCTA TTGTTATGAA CACTAATAAA GATGTTGTTG TTTCTTCTGG AACTGCATCA GGAAAGACAG AAGCCGTCTT TTTACCAATT TTGAGCCAAA TAGAAAAAGA TGCAACCAAA GATTTAAAAA TACTATATAT TTCTCCCCTT AAAGCTTTAA TTAATGATCA GTTTGAGCGT ATTATTAAAC TTTGTGAAAA ATCATATATT CCTATTCATC GTTGGCACGG AGATGTAAAC CAAAATAAAA AGAAACAGTT AACAAAAAAT CCTGCTGGGA TTCTTCAAAT TACCCCAGAA TCAATAGAAA GTTTATTTAT TAATCGAACA AATGAGCTAA ATTACATTCT TAGTGATATA GAATTTATCA TTATAGATGA ATTACATGCT TTTTTAGATA ATGAAAGGGG AGTACATTTA CGTTCCTTAC TTTCTCGGTT AGAGAATTAC ATAAAAGAAA AACCTAGATA CTTCGCACTT TCAGCAACTC TAAACAATTT TAAATTAATA AAAGAATGGA TTAACTATAA TGATATTAAA AATGTTGAAA TAATAGATTC TAATGAAGAC GACAAGGATT TATTACTTAG TTTAATGCAT TTCGATAAAG GAAAAGACTA TAAGAAACCT ATTGATTTAT ATCAAGACCT TAGAGAATTA ACTAAGAATG TACATTCCTT AATTTTCTGT AATAGCCGTG CCGAAGTAGA AGAAACAACA CTTTATTTAA ATCGTCTAGC AAATAGAGAA GTTAATACAG AACTTTATCT TGCTCATCAC TCTTCTATAG ATAAGAAAGA AAGAGAATAT GTAGAAAAAA CTATGGCCAA TTCTAAATCA CCCAAAAGTG TAGTAACCAC TAGTTCCCTT GAATTAGGTA TTGATATTGG AGCTATTGAT TATGTTGTTC AAATTGATGA TACGCATACC GTTTCTTCTT TAAAACAGAG GTTAGGTAGA TCTGGTAGAA AGCTTGGAAC AAATCAGGTT TTACAAGTAT ATAGTACAAC TAATGATAGT CTAGTTCAAT CTTTAGCAGT AATTGATTTA TTATTAGAAA AGTGGATTGA GCCAGCAACG GAATATCCTT TACCTTTAGA TATTTTATTC CATCAAATTA TTTCTATTTG CCACGAAGCA AATGGAGTTA GACTTGATCC ACTTATAGAT AATATCAAAG CAAATGCAGC TTTTTATAAA CTAAAAGAAG AAGATATTAA TCATGTTATT AATTACATGA TAGAAAACGA CTTTTTGCAG TTAATTAGAA ATAGTGCTGA ATTAATTGTA GGACTAGAAG GGGAAAGATT ATTGAGGGGT AAAGAATTCT ATGCTGTTTT TATGACTCAA GAAGAATTTG AAGTGCGGGA AGGTATCAGA AAAATTGGAA GTATAGACAA AAGTTTAATG GTATCTGAAG GTGACAATAT TATATTGGCA GGACAATTAT GGACTATAAA AAATATCGAT ATTGAGCGTG ATATTATTTA TGTAGCTAAA GCTGTTGACG GAAAACCTCC TAAATACTCT GGAGGAGGTT TTATATTAAA TCCCAAAATA CCTGAAAGAA TGCACAAAAT ACTGTGTGAA AGGAAAAACT TCGAGTTTAT TGATAATATG GCTCAAAACC ACTTAGAAGA ACAGAGAAAA CCTTTTGAGT TATACAATAT AAAACCAAAC GAACGAGTAA TTTGGAATAA TGGTGATGAA ATCTTATTTG AAACCTATAC TGGAACAAAA ATATTTCAAA CTTTGGCATG GATTTTACGA TCTTATAATG TGAATATAAA AGAGATTGAT GGAATTGGTA GGATTAACAT TGAAGGTGGT ATTGATTTAC CAGGGGTTTT ACAAGATATA AAAGAAACAG ATTGGCGACC AGAATATTTA CTTGATTTTA CATTAGAGCA AGAAAAGTTC AAATCAAAAT TCAGTCCATA TTTACCTAAA GATTTACAAG ATAAAATGCA TATAGCACAC CTTGTAGATA TTGAAGGGGT TAAGACTTTT TTAGAAAATA AAAAGATTAA GGAAATTAAG CTATAA
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Protein sequence | MSETFYLLSE RMQKKIWEMG WDEFTPVQDK TIPIVMNTNK DVVVSSGTAS GKTEAVFLPI LSQIEKDATK DLKILYISPL KALINDQFER IIKLCEKSYI PIHRWHGDVN QNKKKQLTKN PAGILQITPE SIESLFINRT NELNYILSDI EFIIIDELHA FLDNERGVHL RSLLSRLENY IKEKPRYFAL SATLNNFKLI KEWINYNDIK NVEIIDSNED DKDLLLSLMH FDKGKDYKKP IDLYQDLREL TKNVHSLIFC NSRAEVEETT LYLNRLANRE VNTELYLAHH SSIDKKEREY VEKTMANSKS PKSVVTTSSL ELGIDIGAID YVVQIDDTHT VSSLKQRLGR SGRKLGTNQV LQVYSTTNDS LVQSLAVIDL LLEKWIEPAT EYPLPLDILF HQIISICHEA NGVRLDPLID NIKANAAFYK LKEEDINHVI NYMIENDFLQ LIRNSAELIV GLEGERLLRG KEFYAVFMTQ EEFEVREGIR KIGSIDKSLM VSEGDNIILA GQLWTIKNID IERDIIYVAK AVDGKPPKYS GGGFILNPKI PERMHKILCE RKNFEFIDNM AQNHLEEQRK PFELYNIKPN ERVIWNNGDE ILFETYTGTK IFQTLAWILR SYNVNIKEID GIGRINIEGG IDLPGVLQDI KETDWRPEYL LDFTLEQEKF KSKFSPYLPK DLQDKMHIAH LVDIEGVKTF LENKKIKEIK L
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