Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1519 |
Symbol | |
ID | 6316707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1595622 |
End bp | 1596461 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642643896 |
Product | integrase family protein |
Protein accession | YP_001917687 |
Protein GI | 188586142 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.959361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 3.1361700000000003e-18 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATAAAAG AGAAGCTACT TAAGGACTTT ATTGAAAATT CCAGTAATCA GCACTCAGCC TCAACACTAG AAACATATGA GCGTTATATA AGAAAATTTT TAATGTCTTG GAAAAATGAC CTATCGGAAG TTACCGACGA TGATATTGAT GATTTTCTTA ATGAGTATGA AGAAAAAGGA TATAACTCAC GAACTATACA CGTTATCATT GCAGCGTTAC ATGATTTTTT CTCCCATTTA AAATATAAGA AATATATTAG TGTAATTCCA ACGGTAGATG TTGAAATACC AAACCATGAA AAAAAATTAC CAAAGCCTTT AAGCGAAATA AAAATTATAA AGTTAAAAAA TGAAGCAAAA GACCATCTAC GAGATAGAGC TATTATAGAA GTTTTACATT GGACAGGAGT GCGTGTAAGT GAACTAATAA ACATTAGAAT TGAAGATATT TGGTGGGATA CAAGAGAAAT TTGGATTAGA AAAGGCAAAG GTCTTAAAGA AAGAAATGTA ATAATTAACT ATATATGTAA ACAGTATCTT ATAGAATATC TAGATACAAG AAGCGACGAC ATACCATATT TATTTATAAC CAAGAGAAAA AGACCTTTTA CTCGCCAAGG TGTTAATAAG CTACTGAATA AATATGCAAT TAAAGCTGGC ATTAAAGAAA ATGTGACACC ACATATGTTT AGACATACTT TTATCACAGA CTTAATTAAT AAAGGAGCTG AAGAAGGAGT TGTAGCAGAT CTTGCTGGAC ATGAAGATAT AAAACGGTTA AAAGATTATA CAGAAGTAGC TCGTAAAAGG AAAAAACTAG AATATGAAAA ACTCCATTAA
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Protein sequence | MIKEKLLKDF IENSSNQHSA STLETYERYI RKFLMSWKND LSEVTDDDID DFLNEYEEKG YNSRTIHVII AALHDFFSHL KYKKYISVIP TVDVEIPNHE KKLPKPLSEI KIIKLKNEAK DHLRDRAIIE VLHWTGVRVS ELINIRIEDI WWDTREIWIR KGKGLKERNV IINYICKQYL IEYLDTRSDD IPYLFITKRK RPFTRQGVNK LLNKYAIKAG IKENVTPHMF RHTFITDLIN KGAEEGVVAD LAGHEDIKRL KDYTEVARKR KKLEYEKLH
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