Gene Nther_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1505 
Symbol 
ID6315633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1579323 
End bp1579712 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content27% 
IMG OID642643884 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_001917675 
Protein GI188586130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000220754 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGCTA GTATTTATGA AACAAACAAA TCAAATGGAA AAAATAGAAT TAAGTTAAAG 
AAAAAGTCCA TATGTTTAAT TATATTTATA TTCGCAATAG TGGCAATAAC AAGTGTTTTA
TTACATACAA CAATTTTAGC ATCAGATAAA CAAGATGATA TTATTAATGA AGATAAGGTA
AGTTATCAAA ATAAAGATGC AAATGATGAT GAATTAGAAT ATGAAAAGGT TATTATTAAT
GAAGGTGATA CATTATGGAA CATAGCTATT GAACATACAA ATGAAAATCA AGATCCCAGA
AAATCCATTG AAGAAATCCG CCAGTTAAAT GATATGGATT GTGCAAATAT AACAGTTGGT
GAGAAAATCA AAGTTCCTGA AAGCAATTAA
 
Protein sequence
MPASIYETNK SNGKNRIKLK KKSICLIIFI FAIVAITSVL LHTTILASDK QDDIINEDKV 
SYQNKDANDD ELEYEKVIIN EGDTLWNIAI EHTNENQDPR KSIEEIRQLN DMDCANITVG
EKIKVPESN