Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1499 |
Symbol | |
ID | 6314835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1573521 |
End bp | 1573775 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642643879 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001917670 |
Protein GI | 188586125 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0000000130103 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCAAAAA ACACAATTAA TTTACAGGAT AATGTTTTAA ACCAGGTGAG GAAGAACAAA ATTACAGTAA CTATTTTTTT GGTCAATGGC TATAAAATTC GCGGCCTAAT TAAAAGTTTC GATAATTTCA CACTATTGAT GGAGGTTAAT GGTGAACAAC AGATGATTTA TAAGCATGCA GTTAGTACCA TAATCCCAGG TAAAACTCTC AATCTCTTCT CCGATCAATC CGATAAAAAT GATCAAGAAC AGTAA
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Protein sequence | MSKNTINLQD NVLNQVRKNK ITVTIFLVNG YKIRGLIKSF DNFTLLMEVN GEQQMIYKHA VSTIIPGKTL NLFSDQSDKN DQEQ
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