| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1423 |
|---|
| Symbol | |
|---|
| ID | 6314552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1492411 |
|---|
| End bp | 1494279 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642643803 |
|---|
| Product | protein of unknown function DUF342 |
|---|
| Protein accession | YP_001917594 |
|---|
| Protein GI | 188586049 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000579847 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.370296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC TACCCCAAAG GTTTTCCGGT GAAAACTTAC AAGAAGTTTT AGCGGAAGCT
GCTGAATCAC TATCATGTGA AGTTGAGGAA CTAGAATATA AAGTGATACA GCGAGAAAAG
AAAGGCCTTT TAAGGCGAAC CCCCTGTGTC ATTGAAGTGT CTGGACAGCA TAAAAAAAAT
GACAACACAA ACACGGGTGA TAATAATGGT ATAGTGGCCG AAACGGCAGC TAGTAATGAC
CCTGCGGAAG AGAAACTAAA TGTCAGTATT GATGGATATT ATGAGATATC GGAAGAAGAC
AATGCTATTT ATTTAGTTGT ATACCCTCCT GAAAATCGAG GTAATTATGT CAAGTGGAAA
GATGTTAAGA GTAAATTAGA AGAAAAAGGT TTTGAAATCC TCGATGAGGC ATTTATAGTA
GAAATTGTCA GAAAATCGGA AGGCCAAAAA GTAGATATTT CTGAATATAT TGAGGAACAT
GTAATAGATG GATCTTTTGA AATTAGAGTT GCTGAAGACA ATATGAAAGC ACTGTTAAAG
GTGAATTTAC CTCAAGGAAG AGGAAAGGAA GTTAATTTAG AAGAAATTAC TCAGGCCCTA
AGTGAACGAA AAATCAGTCA AAATTTAGAT TTTCAAGCAA TACATAAATG TGTAAGTGAA
GGCACACAAG GCGAATTCAG AACTATTGCC ACCGGAGATC AGCCTATAGA TGGAAAAGAC
GCAGAGATCC AACTACATTT TGAAGAAAAA GAAAGAAAAC CTGTAGTTAA AGAAGACGGA
AGTGTGGACT ATTATAATAT TGATAATGTT ACTAATGTTA AAGCCGAGGA CCTCTTGGCG
AGCAAACATC CTCCAGAGGA GGGTAGTCCC GGTAAAGATG TATATGGAAA TATAGTGTCT
CCCAAACCAG GAACTGATCG GCAAATAAAA AGAGGTAAAA ATACCGAGTT AAGCGAAGAT
GAAATGGAGT TAAGAGCATC TATAGATGGA CAGGTAGTCA TGAATAATGA CGGGTTTATT
CACGTATATC CTGTTTATGA AGTTTCTGGT GATGTGGATG TTTCAACAGG AAATATTGAT
TTTGTGGGTA ATGTTATTGT AAAAGGACAG ATAAAAAGTG GTTTAAAGGT TAAGGCTGCT
GGGGATGTAG AAGTCCGTAA AAGTGTTGAT AGTTGTATAA TAGAAGCGGG AGGCAATGTC
GATATTAAAG GCGGCATTCA AGGTAGGAAC AAAGGGTCTA TTACTGCAGG TGGCTCGGTA
ACTTGCAAAT TCATCGAAAA TGCTCAAGTT TCTGCTGAAG GAGATATTAA TGTTATTGAA
GGTATTCTCC ATAGTCAGGT AGAAGGTAAT AAAATAAATG TTTTTGAAGG AAAAAAAGGT
TTACTCGTAG GTGGCAAAGT AACTGCAAGA GAAGAGGTAG TAGCTAAAAT GATTGGATCC
AGTTTTGCCA CTGCCACTCA TGTAGCTGTC GGCTTAGACC CTGAATTAAG GAAAAAGTCT
TCAGATATAG ATACAGAACT GAAAAACACC AACGAAAACC TGGAAAAAAC AGATAAAGCT
ATTGCAATAC TACAGAAGGT CAAGCAAACT AAAGGGGCGC TGCCTAAGGA TAAAGAAAAT
ATGCTTGTTA GATTGCAAAG GACTAAATCC CACTTAGACC AAACAAAACA GCAATTATGC
AGCCAAAAAG AGGAAATAAA AAATATTTTA AAAGATAAAA CAGATGGCAG AGTTATAGCA
AAAAAGGTGG TTTATCCTGG AGTCAAAGTA ACCATTGGTG AAGTCTCGTA TAATATAAAG
GATGAACAAA AGAGTAGTAT GTTTAGATTG TCCTCTGATG GAGAAGTTTC CAGTGAGCCT
GTATCTTAA
|
|---|
| Protein sequence | MAELPQRFSG ENLQEVLAEA AESLSCEVEE LEYKVIQREK KGLLRRTPCV IEVSGQHKKN
DNTNTGDNNG IVAETAASND PAEEKLNVSI DGYYEISEED NAIYLVVYPP ENRGNYVKWK
DVKSKLEEKG FEILDEAFIV EIVRKSEGQK VDISEYIEEH VIDGSFEIRV AEDNMKALLK
VNLPQGRGKE VNLEEITQAL SERKISQNLD FQAIHKCVSE GTQGEFRTIA TGDQPIDGKD
AEIQLHFEEK ERKPVVKEDG SVDYYNIDNV TNVKAEDLLA SKHPPEEGSP GKDVYGNIVS
PKPGTDRQIK RGKNTELSED EMELRASIDG QVVMNNDGFI HVYPVYEVSG DVDVSTGNID
FVGNVIVKGQ IKSGLKVKAA GDVEVRKSVD SCIIEAGGNV DIKGGIQGRN KGSITAGGSV
TCKFIENAQV SAEGDINVIE GILHSQVEGN KINVFEGKKG LLVGGKVTAR EEVVAKMIGS
SFATATHVAV GLDPELRKKS SDIDTELKNT NENLEKTDKA IAILQKVKQT KGALPKDKEN
MLVRLQRTKS HLDQTKQQLC SQKEEIKNIL KDKTDGRVIA KKVVYPGVKV TIGEVSYNIK
DEQKSSMFRL SSDGEVSSEP VS
|
|---|
| |