Gene Nther_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1397 
Symbol 
ID6314614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1468513 
End bp1470426 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content34% 
IMG OID642643777 
Productflagellar hook-length control protein 
Protein accessionYP_001917568 
Protein GI188586023 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.761037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAGTG CAGGTGTAGA TCTTATGACA CAAGTCATGC ATGCTAGGGA ACAGGGAGTC 
AAATCAGATT CTCGACAAAA AACTGGGAAT AGTAGTTTTC AAGATCAATT ACAACAATTA
GTTGATAATG AAAAACTTAC AGATAAGGAA ACAATTTTAC TAGATGAGTC CGGTTCATTT
ACTGAAGAAT TAATGAAGGA TGAATTAGAC CAACTTTTTT CACAAGAAGT ACTTAATCAG
TTACCAGATA AGCTGTCAGA GTTAATAGAG CTTTTAGAAA ATCAAGAGCA ACTTATTGAG
CAGTTAATAG GCGCAGAAAT TTTAGACGAG GCAGACTTAA CCAAACTACA TCAAAAATTG
ACTGGCCAAA AAGAAGTCTT CAAAGAAATG ATTCTTGAAA ATATGGAAGA AATAGACCAA
GATTCAGAGG TATCTGATTT AATTGGTACT CTAACAATCA AAAATAAACA TAATTTATCC
CCTGAATTAA AAGAGCTAAT GGACCAAGAC TTAAAAGTAA TAGATTTAAA CTTAGAACAA
TTAAACCAAA TAATACAGAA AGATGATGTT GAAATCGAAC TAGATTCTGA ACAGATGATA
GAAGAGTTGA CTTTGGAAGA TATGATGTTT TGGTTGCAAG TTGAAGATTT AGCAGAATCC
TTGAAAAATA TACAATCACT ACTTGACTAT CAAGACATTG ACGGCAAATT ACAAAAATTA
TTTGCAGAAC TTGAACAAGT GATGAATTCG TCGGACCAGA TTGACTCAAG ACAAGAAGCT
CTTGACCATA TAAAAAAGAA ATACTCACAG GATAACGCTT CACAGTTATT TTCCCAAGAC
AAGGCTGAGT TAGATTTAGA ATTTAATGAA ATTCATATGC AAAACGAGGA CAGCACAAAA
AATATCCTAA AGGAACTGAA GAAGATCAGC CAACTTATAA ACGCCCTGGG AGAAGATAAT
CTTGAGTCAA AAAAGTCAAA AATATTAATT ACAGAACTTA AAGCTGAAGA AGCAGAGTTT
GTTAAACAGT TACTTGCTAC TAGTATTGCC ACCACTAGTG ACAATGAAAG TTCTTACCAA
CTAGATATGG ATAATAAGAA CATATTTAAA CAGCTAGCTG AACTAAACCA TGGAAAAGAT
GGTTCTCTAA ATGACGCCAA CTTCAATGTT ACTAAACAAA TGCAAGAAAA AATCCAAAAT
ATCATGCAGG CTATTGAAAA CAAAGACGAA CCAACAGTTA CTGAAGATTA TCTATTTTCC
AAGTTAGAGC AAATTTTGAG CCAAGATTCG AGTGCGAGCT TTTCACAGCA GTTCCACAGC
AGTAATTTTG GAGCTTTTGC TGAAGGTGAG GAGAACAATG TTAGTGTTAA TCAAATCATT
GATCTTACTC AACACTTTAA TAATGATCAA GATGTAAAAC CCGTTGAAAA ACTGTTTAGC
CAAAGAAGTC AAGAATTAGT TAATAATTTA CGTGAAGCAA TCTTGCAACA GGTTAATTTA
GAACAGGAAG GCGATACTCA CACCTTAAAA ATGAAATTGA AACCAGAACA ACTGGGACAG
TTACGGATGC AGTTCTCATA TCAAGATGGT GAATTAAAAG GACATATTTT TACACAGAAC
GCACAAGCTC GTGATGTCAT TCAGGCAAAT CTGGTTGAAC TTCGAAATCA GCTAGGCGAA
CAAGGGCTCG AGTTTAACGA ACTGGATGTG TCAGTAGATC AGGAACAGGA TGATGAAAAC
GGAGAATTTG ACTTACACAG ATTCAATTTT AGACAAAACA TTAGTGAAGA TGGTGAAGAG
AATTCTCAGG ATGAACAGGA TGAGTTGGAT TACCAATCAG AGGACAGATT AGCAGTAAAC
TACGAAAATA ATGGCTACGG TTATAACCAT GGTTCAATTG ACTTACGTAT TTAA
 
Protein sequence
MNSAGVDLMT QVMHAREQGV KSDSRQKTGN SSFQDQLQQL VDNEKLTDKE TILLDESGSF 
TEELMKDELD QLFSQEVLNQ LPDKLSELIE LLENQEQLIE QLIGAEILDE ADLTKLHQKL
TGQKEVFKEM ILENMEEIDQ DSEVSDLIGT LTIKNKHNLS PELKELMDQD LKVIDLNLEQ
LNQIIQKDDV EIELDSEQMI EELTLEDMMF WLQVEDLAES LKNIQSLLDY QDIDGKLQKL
FAELEQVMNS SDQIDSRQEA LDHIKKKYSQ DNASQLFSQD KAELDLEFNE IHMQNEDSTK
NILKELKKIS QLINALGEDN LESKKSKILI TELKAEEAEF VKQLLATSIA TTSDNESSYQ
LDMDNKNIFK QLAELNHGKD GSLNDANFNV TKQMQEKIQN IMQAIENKDE PTVTEDYLFS
KLEQILSQDS SASFSQQFHS SNFGAFAEGE ENNVSVNQII DLTQHFNNDQ DVKPVEKLFS
QRSQELVNNL REAILQQVNL EQEGDTHTLK MKLKPEQLGQ LRMQFSYQDG ELKGHIFTQN
AQARDVIQAN LVELRNQLGE QGLEFNELDV SVDQEQDDEN GEFDLHRFNF RQNISEDGEE
NSQDEQDELD YQSEDRLAVN YENNGYGYNH GSIDLRI