| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1381 |
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| Symbol | |
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| ID | 6316634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1451970 |
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| End bp | 1454057 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642643761 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001917552 |
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| Protein GI | 188586007 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.500118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCAAGTA ATTTAGTTAT AGTTGAATCT CCGGCCAAGG CTCAGACGAT TAAAAGATAC
CTTGGAAAAC AATACAAAGT AAAAGCATCA ATGGGGCATT TAATAGACCT CCCAAAAAGT
CAGATGGGAA TAGAAATTAA TGAAGTATTC AAGCCAAAAT ATATAACAAT TAGAGGGAAA
GGTAAAATTC TCTCAGAGCT TAAAAAAGAG GCCAAAAAAG CCGACAGAGT TTATCTGGCA
GGGGACCCTG ACCGAGAAGG GGAAGCTATC TGTTGGCACT TGGGGCGAGC TTTAGGAATA
GATGAAGATG AACATTGCCG CGTCGAATTT AATGAAATTA CTAAGGATGC AATAAAAGCG
GCTTTTAAAG AACCAAGAAA AATCGCTTAT AACTTAGTTA ATGCACAACA GGCTCGACGA
GTACTGGACC GGCTTGTTGG TTATAATATT AGTCCCATTT TGTGGAAAAA AGTAAGAAAA
GGATTGAGTG CGGGAAGGGT TCAGTCGGTA GCGGTTAGGC TCATTTGCGA TAGAGAACAA
GAGATCAAAG AATTTGTTCC AGAAGAGTAT TGGACCCTGA TTGCTCAATT CAGTAAAGAT
GGAGAAAAAT TTGAAGGTAA ACTGCAAGAA GTTGACGGCA AAAAAGCTGA GATTCCCAAT
GAAGAAAGAA TGAACGAGAT ACTATCAAAG TTAGAAAATG CTACGTACAA GGTTCATAAG
GTAGAGAAAA AAGAACGCAA AAGAAACCCG AATCCTCCAT TCATAACAAG CACATTACAG
CAAGACGCAT ATAGACGATT GGGTTTTTCT GCACGAAGAA CTATGAGAAC AGCTCAACAA
TTATATGAAG GTATTAAGGT GTCTGGTGAA GGACATGTGG GTTTAATAAC TTATTTAAGA
ACGGATTCCA CTAGGATTAG TCAAAGTGCT TTGACTGCTG CTAAAGAATA TATCCTGGAG
GAATATGGCG AAGACTACTA TCCCGGGAAA CCGAGAACGT TTAAAGGTGG CAAAGGATCC
CAGGATGCTC ACGAGTGTAT TCGCCCAACT AGGACGGATT TATCACCTGA AAAAATTAAA
TCGGCCCTGA GTAATGACCA ATTTAAATTG TATAAATTAA TTTGGAATCG ATTTATTGCA
AGTCAGATGG CTCCAGCCAA GTACGATACC GTTGCTGCTG ATATTTATGC TGCTGGTACT
ATGAAGTTTA GGGCTCGAGG TTCTCAACTT AAATTTCCAG GCTTTTTAGC TTTGGGACAT
GAAGACCAGG ATAAAGATGA AATTTTGCCT GAATTAAAAC AGGATGATTT GTTAGATTTA
GAAGAATTGC AACCTAACCA ACACTTTACT CAACCACCGC CTCGATACAG TGAGGCCTCT
CTTGTAAAAA CTTTAGAAAA AGAAGGTATA GGTCGTCCTA GTACTTATGC ACCAATTATA
GAAACTATTC AAACAAAGGG GTATGTGATT CAGGAGGAGA AGAGACTATA TCCGACTCAA
CTTGGTGAAA TAGTAGTTGA ACAACTTAAA GAATTTTTTC CTGATGTATT AGATGTAGAT
TTTACTGCAG AAGTAGAACA GGGTTTAGAT AAAATTGAAG ATGGTGAAAA AGACTGGCAA
GAGTTCTTAT ATGAATTCTA CGAACCCTTT GAGAAACAAG TAAAAACAGC TGAAGAAGAG
ATGAAGAAAA TTGAACTAGA AGAAGAACAG ACGGATGTAG AATGTGAAAA ATGTGGTAGT
TACATGGTGG TAAAACATGG CCGTTATGGA AAGTTTTTGG CTTGTCCTAA TTTTCCTGAT
TGTAAAAATA CCAAATCCTT TGTTAAGGAA TTGAATGTAG AATGTCCTAA ATGTCAGGGA
ACTATTGTAG AAAGAAAGAG TAAAAAAGGC AGAAAGTTTT TGGGATGCAA TAATTATCCA
GACTGTGATT TTATAACTTG GTATAAACCT GTTGAAGGAA AAAAATGCCC TAAATGCGAA
TCTTTTCTAG TACAGCGCGG TAAAAAGAAC AAGTACTACC AGTGTAGTCA TCCAGATTGT
GATTATTCCG CCGATGCCGT GGAAGAACAA GAAGAGAAAC AGAGCTGA
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| Protein sequence | MASNLVIVES PAKAQTIKRY LGKQYKVKAS MGHLIDLPKS QMGIEINEVF KPKYITIRGK
GKILSELKKE AKKADRVYLA GDPDREGEAI CWHLGRALGI DEDEHCRVEF NEITKDAIKA
AFKEPRKIAY NLVNAQQARR VLDRLVGYNI SPILWKKVRK GLSAGRVQSV AVRLICDREQ
EIKEFVPEEY WTLIAQFSKD GEKFEGKLQE VDGKKAEIPN EERMNEILSK LENATYKVHK
VEKKERKRNP NPPFITSTLQ QDAYRRLGFS ARRTMRTAQQ LYEGIKVSGE GHVGLITYLR
TDSTRISQSA LTAAKEYILE EYGEDYYPGK PRTFKGGKGS QDAHECIRPT RTDLSPEKIK
SALSNDQFKL YKLIWNRFIA SQMAPAKYDT VAADIYAAGT MKFRARGSQL KFPGFLALGH
EDQDKDEILP ELKQDDLLDL EELQPNQHFT QPPPRYSEAS LVKTLEKEGI GRPSTYAPII
ETIQTKGYVI QEEKRLYPTQ LGEIVVEQLK EFFPDVLDVD FTAEVEQGLD KIEDGEKDWQ
EFLYEFYEPF EKQVKTAEEE MKKIELEEEQ TDVECEKCGS YMVVKHGRYG KFLACPNFPD
CKNTKSFVKE LNVECPKCQG TIVERKSKKG RKFLGCNNYP DCDFITWYKP VEGKKCPKCE
SFLVQRGKKN KYYQCSHPDC DYSADAVEEQ EEKQS
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