Gene Nther_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1212 
Symbol 
ID6316837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1283702 
End bp1284928 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content36% 
IMG OID642643585 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001917383 
Protein GI188585838 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0694435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTTA ACAATATCTA CATTATTATA CCCTTATTAT TTTTAATGAT TGTTAATCCC 
CTGTTATCAC CATCAGTTTC AGCCGAAGAA TTTGACTTTG ATGCAGAATC AGTTATATTA
ATCGAAGCTG AAACAGGGAG AACCATTTAC GAAAATAATG CCGAGAAAAG TTGGCCACCA
GCTAGTTTGA CCAAAGTAAT GACTCTTGTA ATTGGTTTAG AAGCTCTAAA TGAAGGTGAG
CTAGAACTTG AAGAAACAAC CAGAGTTAGT GCCAAGGCCA ATCAAACGGG CGGCAGTCAG
ATGTTTCTCA GAGAAAATCA AGAAGTTACC ATTGAAGATC TCCTGACTGG AATCGCTGTA
GTTTCTGCTA ATGACGGTTG TGTTGCTCTA GCAGAACATA TGGAAGGTTC AGTAAATAAT
TTTGTCAATC GCATGAATGA AAAGGCAGAA GAAATAGGAT TAGAAAACAC TAATTTTAAA
GACCCTCATG GTTTAGCTTC TGATGGGCAG TATATGAACG CTCGTGATGT AGCTCGACTA
TCCCAGTATG CCGTTAATGA AACGCCTAAA ATTTTAGAAT TAGAAAGTAT AACTGGATTT
CAATTCAATA TTGAAAGCAC CCAATATAAT AGAAATTTAA TGTTACCTGA CCACCCCCAA
ACCACAAGAT ATTCCTATGA AGGAACGGAT GGTTTGAAAA CTGGTCAAAT CGAAGAAGCA
GGTTATAACT TTGTGGGTAC TGCCCAACGC GACGATATGA GACTAATTGC AGTTGTTTTA
GGTGCTGAAG AACAAACTGA AAGATTTAAT ATTACTCGCC AACTTTTTGA TCACGGATTC
TCGGAGTATC AAAAAATAAA GTTATTTGAT GAAGGTGACG AATTGGAACA AGTAGATGTT
AAAGATGGCT CAGAACGCCA AACAATGGCA ATATCAGAAA CTGAAGCAAA TGTAACTACC
AAGTTTGACA ATGATCAAGA ACTTGAATTT GTATTTCAAC CAAAAGATGA AGAACTTAGA
GCCCCAATCC AAAAAGGTGA ATATTTAGGT GAGTTATTAG TCATTGAAGA CGGAAAAGAA
ATAGCTTCTA TCCCCGGAAT TGCTCAAGAT GAAGTAGAAG AACTTGGTTT TTTTGGTAGA
ATTGCTAGAA CAATTAGTGA TGCAATATCC AACACATTTG AGAGTATAAA AGATAGTATA
GTCGACTTTA TTTTTGGCGA TGATTAA
 
Protein sequence
MKFNNIYIII PLLFLMIVNP LLSPSVSAEE FDFDAESVIL IEAETGRTIY ENNAEKSWPP 
ASLTKVMTLV IGLEALNEGE LELEETTRVS AKANQTGGSQ MFLRENQEVT IEDLLTGIAV
VSANDGCVAL AEHMEGSVNN FVNRMNEKAE EIGLENTNFK DPHGLASDGQ YMNARDVARL
SQYAVNETPK ILELESITGF QFNIESTQYN RNLMLPDHPQ TTRYSYEGTD GLKTGQIEEA
GYNFVGTAQR DDMRLIAVVL GAEEQTERFN ITRQLFDHGF SEYQKIKLFD EGDELEQVDV
KDGSERQTMA ISETEANVTT KFDNDQELEF VFQPKDEELR APIQKGEYLG ELLVIEDGKE
IASIPGIAQD EVEELGFFGR IARTISDAIS NTFESIKDSI VDFIFGDD