Gene Nther_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1178 
Symbol 
ID6315312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1248416 
End bp1249495 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content36% 
IMG OID642643551 
Productstage II sporulation protein P 
Protein accessionYP_001917349 
Protein GI188585804 
COG category 
COG ID 
TIGRFAM ID[TIGR02867] stage II sporulation protein P 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00552043 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00108571 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAAAAA ATTTTCACAA GACTGTTAAT AACAAGACAG GTAAAAGAAA AAAAAGCTTA 
AAACAAAGTC TCTTAGTTTG TATTTCAGTT GTATTTGGAG TTTCTGTGAT TATACAATTA
TTATTATCCA TATTAGGAAG TATATTCATT GAAAAACCAT ATGTATGGTT TTTAGAACAA
GAATTACCCG GATTTTATGT TATGGAAATT CAAGATCCCC CTATTACTAG CTTAACTGAT
GCTTTAGACA AACTGTTACT TCATCCATTA GCTGTTGACA GTAACTCACC AGAAACAATT
TTAGGAACAC AGTTTTCTCC AGTTAGGGAT TATTCAAAGG AAATCCAAGC CATGGCTGAA
GAACAGAAAC CAGATCAGAA AAGCTCTAAA GAAGTAGTCT GGCAAGAAGA AACAGGCTTG
GATTTGAGCG AGTTACCAGA GGAACCAATT GAAGATAGTC CACAAATAGT AGCGGAAGGT
GAAAATCTAG ATGGCAAAGT AGGGATTTAT CATTCCCACA CTACCGAAAG TTTCGTACCA
GATAGTGGTG AACCATTTAC TGAAAATTTG GATAAAACAG TAGTAGAGCT AGGTCGGAAG
TTGACTGAGG AACTAGCAGA TTATAATATA GAAACTGTTC ATACCGAGGA AGTCCATGAT
CTTCCAACTA GGAGAGATAG TTATTCGAGA AGTTTACCTA CAATAGAAAA TATGATGGAA
GAAAACCCTG AAATTGATGT ATTATTAGAT ATACATAGAG ATGGAGTCCC TCGGAATATG
ACCACTACAG AAATAGAAGG GGAACAAGTC GGGAAAATTT TAATACTGGT TGGTTCTGAA
GGTAATCCTG ATTGGCGGGA AAACTATCGT TTTGCCCTGC AGCTACAAAA ACAATTAGAA
AAAATCCATC CTGACTTATC TCGGGGTATT AGGACAAGGA ATTTTTCATA TAATCAGGAA
GTTCATTCCA GATCATTACT GATAGAAATT GGAGGTCATG AAAATAGTTT AGAAGAAGCA
AAAAATACTA TTCCATACCT AGCTGAAGCT CTGAAAAAGG CGGCATTTGC TGGTGATTGA
 
Protein sequence
MTKNFHKTVN NKTGKRKKSL KQSLLVCISV VFGVSVIIQL LLSILGSIFI EKPYVWFLEQ 
ELPGFYVMEI QDPPITSLTD ALDKLLLHPL AVDSNSPETI LGTQFSPVRD YSKEIQAMAE
EQKPDQKSSK EVVWQEETGL DLSELPEEPI EDSPQIVAEG ENLDGKVGIY HSHTTESFVP
DSGEPFTENL DKTVVELGRK LTEELADYNI ETVHTEEVHD LPTRRDSYSR SLPTIENMME
ENPEIDVLLD IHRDGVPRNM TTTEIEGEQV GKILILVGSE GNPDWRENYR FALQLQKQLE
KIHPDLSRGI RTRNFSYNQE VHSRSLLIEI GGHENSLEEA KNTIPYLAEA LKKAAFAGD