Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1161 |
Symbol | |
ID | 6315643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1229355 |
End bp | 1230158 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642643534 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001917332 |
Protein GI | 188585787 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0013559 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATCAAT TAATTACACC TATGTATAAA CCTAAATATC CTGTTCAAAC GCTAGAAAAA GCTTTTGAAA TTGTAGAAAT ATTATCATTA CAAGAATCCG ATGATGGTCT AGGAGTCAGC GAATTGAGTA GTAGATTAAA CATTGGTAAG AGCACTATTC ATAGATTGTT AGATACTCTA GTTGCCTATC AGTACGTTGA AAAACTACCT GACAACAAAT ATAGACTGAG CTGGAAAATT TTTCAGTTAG GAAGTGCCGT ACCCAGGCAG AGATCTGTAG GTAATCTAGA TCCTAAATAC CTAAAAGAAC TATGTGAAAA GTTTCAAGAA ACTGTCAACT TAGGGGTTAA AGAAGGAAGA GACGTAGTAG TTGTTTCTAA GGTGGAGCCA GAAACCAGCT ATAGATTAAA GGCTAATTTC CATGTAGGTG AAAAAGAACC CTTTTATGCA ACTGCTATGG GAAAAGTGCT GTTTTCTGAA TTGAGAGAAG AAAATCTCAG ACAACTACTA GAAGACTTTC AGTTAGAAAA ATTGACAGAA AAAACCATTA CATCAGTGGA CGAGCTTTTG AATGAGTTAA GAAATGTAAA GAAACAAGGT TATGCTATTG ACGATGAAGA GTATTGTAAA GGACTATGTT GTATAGCCAT GCCTGTTAAG GATTTTTCCG GAAAGACAGT TGCGGCCATT AGTGTGAGTG GTCCTTCTTT TAGATTAGAT TTTAAGAAAA TGATGACAAT TAAAGAAGAA CTAGAGAGAG TTACTACAGA GGTCAGTCGC CATTTCGGTT ATGGTGTTAA ATAA
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Protein sequence | MNQLITPMYK PKYPVQTLEK AFEIVEILSL QESDDGLGVS ELSSRLNIGK STIHRLLDTL VAYQYVEKLP DNKYRLSWKI FQLGSAVPRQ RSVGNLDPKY LKELCEKFQE TVNLGVKEGR DVVVVSKVEP ETSYRLKANF HVGEKEPFYA TAMGKVLFSE LREENLRQLL EDFQLEKLTE KTITSVDELL NELRNVKKQG YAIDDEEYCK GLCCIAMPVK DFSGKTVAAI SVSGPSFRLD FKKMMTIKEE LERVTTEVSR HFGYGVK
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