Gene Nther_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1161 
Symbol 
ID6315643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1229355 
End bp1230158 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content35% 
IMG OID642643534 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001917332 
Protein GI188585787 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0013559 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATCAAT TAATTACACC TATGTATAAA CCTAAATATC CTGTTCAAAC GCTAGAAAAA 
GCTTTTGAAA TTGTAGAAAT ATTATCATTA CAAGAATCCG ATGATGGTCT AGGAGTCAGC
GAATTGAGTA GTAGATTAAA CATTGGTAAG AGCACTATTC ATAGATTGTT AGATACTCTA
GTTGCCTATC AGTACGTTGA AAAACTACCT GACAACAAAT ATAGACTGAG CTGGAAAATT
TTTCAGTTAG GAAGTGCCGT ACCCAGGCAG AGATCTGTAG GTAATCTAGA TCCTAAATAC
CTAAAAGAAC TATGTGAAAA GTTTCAAGAA ACTGTCAACT TAGGGGTTAA AGAAGGAAGA
GACGTAGTAG TTGTTTCTAA GGTGGAGCCA GAAACCAGCT ATAGATTAAA GGCTAATTTC
CATGTAGGTG AAAAAGAACC CTTTTATGCA ACTGCTATGG GAAAAGTGCT GTTTTCTGAA
TTGAGAGAAG AAAATCTCAG ACAACTACTA GAAGACTTTC AGTTAGAAAA ATTGACAGAA
AAAACCATTA CATCAGTGGA CGAGCTTTTG AATGAGTTAA GAAATGTAAA GAAACAAGGT
TATGCTATTG ACGATGAAGA GTATTGTAAA GGACTATGTT GTATAGCCAT GCCTGTTAAG
GATTTTTCCG GAAAGACAGT TGCGGCCATT AGTGTGAGTG GTCCTTCTTT TAGATTAGAT
TTTAAGAAAA TGATGACAAT TAAAGAAGAA CTAGAGAGAG TTACTACAGA GGTCAGTCGC
CATTTCGGTT ATGGTGTTAA ATAA
 
Protein sequence
MNQLITPMYK PKYPVQTLEK AFEIVEILSL QESDDGLGVS ELSSRLNIGK STIHRLLDTL 
VAYQYVEKLP DNKYRLSWKI FQLGSAVPRQ RSVGNLDPKY LKELCEKFQE TVNLGVKEGR
DVVVVSKVEP ETSYRLKANF HVGEKEPFYA TAMGKVLFSE LREENLRQLL EDFQLEKLTE
KTITSVDELL NELRNVKKQG YAIDDEEYCK GLCCIAMPVK DFSGKTVAAI SVSGPSFRLD
FKKMMTIKEE LERVTTEVSR HFGYGVK