Gene Nther_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1117 
Symbol 
ID6315346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1183731 
End bp1184426 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content34% 
IMG OID642643489 
ProductGlycerophosphodiester phosphodiesterase 
Protein accessionYP_001917288 
Protein GI188585743 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.14837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.407637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCA TCGCACATAG AGGTGCTAAT AATCTAGCAC CTGAAAACAC ACTATCTTCT 
TTTAACAAAG CATTACAATT AGGTGCAGAT GGAATTGAAA TGGACGTACA ACTATCTAGA
GATGGCGAAC CCGTAATAAT ACATGATGAG TACTTGGATA GAACAACCAA CGGAATGGGT
GCTGTGAGGG ACTTCAATCA TACGGAGCTA CAAAAGCTTG ACGCTGGTAG CTGGTTTTCA
ACTTCTTATT TAAATGAATC CATTCCTACT CTAAAAGAAG TTTTTCGAAC TTTTAAATCT
AATGAACTCA TAATTAATGT GGAATTGAAA AATGACAATA TACAATATCC TGGTTTAGAA
GAAAAAGTCA TTTCTTTGAT TGATTATTTT AATTTATTTG AACGAGTAAT TGTCTCTTCT
TTTAATCATA ATAGTTTGTT TAAAGTTAGT CGCCTCGACT CTAGAGTAAA ATTAGGATTA
TTGTATGACC AATCTAGACC AAATACAAAC AAGTTAGAGA ATAAGGTGGA TTTTTATACT
ATTCATCCTC ATAATTCCTT AGATTATAAA AAACCCCATA AAAAACAGGC CAGGGTATTA
CCCTGGCCTG TTAATAACAG AGAAGAGGCA ATCAAACTGG CTAAAAGCCA CGAAATATTC
GGGATAATTA CAGATTTTCC CGAACTGTTT TGTTAA
 
Protein sequence
MLIIAHRGAN NLAPENTLSS FNKALQLGAD GIEMDVQLSR DGEPVIIHDE YLDRTTNGMG 
AVRDFNHTEL QKLDAGSWFS TSYLNESIPT LKEVFRTFKS NELIINVELK NDNIQYPGLE
EKVISLIDYF NLFERVIVSS FNHNSLFKVS RLDSRVKLGL LYDQSRPNTN KLENKVDFYT
IHPHNSLDYK KPHKKQARVL PWPVNNREEA IKLAKSHEIF GIITDFPELF C