Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1117 |
Symbol | |
ID | 6315346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1183731 |
End bp | 1184426 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642643489 |
Product | Glycerophosphodiester phosphodiesterase |
Protein accession | YP_001917288 |
Protein GI | 188585743 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.14837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.407637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGATCA TCGCACATAG AGGTGCTAAT AATCTAGCAC CTGAAAACAC ACTATCTTCT TTTAACAAAG CATTACAATT AGGTGCAGAT GGAATTGAAA TGGACGTACA ACTATCTAGA GATGGCGAAC CCGTAATAAT ACATGATGAG TACTTGGATA GAACAACCAA CGGAATGGGT GCTGTGAGGG ACTTCAATCA TACGGAGCTA CAAAAGCTTG ACGCTGGTAG CTGGTTTTCA ACTTCTTATT TAAATGAATC CATTCCTACT CTAAAAGAAG TTTTTCGAAC TTTTAAATCT AATGAACTCA TAATTAATGT GGAATTGAAA AATGACAATA TACAATATCC TGGTTTAGAA GAAAAAGTCA TTTCTTTGAT TGATTATTTT AATTTATTTG AACGAGTAAT TGTCTCTTCT TTTAATCATA ATAGTTTGTT TAAAGTTAGT CGCCTCGACT CTAGAGTAAA ATTAGGATTA TTGTATGACC AATCTAGACC AAATACAAAC AAGTTAGAGA ATAAGGTGGA TTTTTATACT ATTCATCCTC ATAATTCCTT AGATTATAAA AAACCCCATA AAAAACAGGC CAGGGTATTA CCCTGGCCTG TTAATAACAG AGAAGAGGCA ATCAAACTGG CTAAAAGCCA CGAAATATTC GGGATAATTA CAGATTTTCC CGAACTGTTT TGTTAA
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Protein sequence | MLIIAHRGAN NLAPENTLSS FNKALQLGAD GIEMDVQLSR DGEPVIIHDE YLDRTTNGMG AVRDFNHTEL QKLDAGSWFS TSYLNESIPT LKEVFRTFKS NELIINVELK NDNIQYPGLE EKVISLIDYF NLFERVIVSS FNHNSLFKVS RLDSRVKLGL LYDQSRPNTN KLENKVDFYT IHPHNSLDYK KPHKKQARVL PWPVNNREEA IKLAKSHEIF GIITDFPELF C
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