Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1106 |
Symbol | |
ID | 6315324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1169704 |
End bp | 1171614 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642643478 |
Product | helicase c2 |
Protein accession | YP_001917277 |
Protein GI | 188585732 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.243566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTCTC AATGGGAGGA ACTGGATCAG ATTTGGGAAG ACTTACAGCA TCATATCGAT AAATTCGAAA CTAGAGAAGG ACAAATAGAT ATGAGCCTTG GGGTTTTAAA AGCTCTCCAA GATGGAGGGC ATTTTGTAGT AGAGGCAGGA ACTGGTACAG GAAAGTCCCT GGCCTATCTG TTGCCTGCAG TTCAGCTGGC ACAGGATGAA TTTAGAATGG TTATCTCTAC AGCTACCATC GCCTTACAAG AACAACTACT TCAGAAGGAT ATCCCTTTGG TTGAAAAAAT TATTGGGAGA ACCCTGAGAG TTGAAGTGAT TAAAGGTAGA AGCAATTATC TTTGTAAACA GAAATTTAAT CAACATTTTG GACAAACAAG CTTTGTTAAC TCAATTCAAG AGCGTGAACT GATTGAATGG GTAAATGAAA CAGAGACGGG TGATCGCAAT GAACTCCAAA CAATGCCGGA AATTTGGGAA AAAGTTTGTT CTCAAAGCGA AAGTTGCTTG GCTATGAGAT GTCAATTTTA CAGTGAATGC TTTGTGGTTA AATTGAGAAA AAGGGCAGAA ACTGCAGAAC TGTTAGTAAC TAACCATCAT TTATATTTTA GTGATCTTAA TCTAAGAATA GATTCAGATG GGTCTATGTC TATTTTCCCT GATTATGAAG GAGTTATTTT TGATGAAGCT CATCATATAC CTGATACGGC CACTAAATCT CTCGGAAGGG AAGTGAAATA TTCCCGGGTA ATAAAATTAT TTAAAGAAGT GACCAGCTAT TTAAAACAAA AATTTCAAGC TCAAGTGAAT TTAGTCCAAG AGGCGGAAGC CAGTGCCGTT AAGGCTTTTA ATAAACTTTC TGATTTCAGA GAAAGTGATT ATTTATTAAG GGAATTAGAT TCATTTATCT CCCTAAAGGA ATTTAGAAAA AAGTTATCTA AATTAGCACA ACATGTGGAG GAATGTGCGT TAGAAGAAAT GGATCGACCA GAACAACCAA GAATGTTGGC TTCTAGATTA AATAAGACAA AGCTTGACTT GGATTTGATA TTAGATTTAG AGGAAGAGGA CTATATTTCA TGGGTTAATC AGCAATCATC GGACATTTCT TTATCAACAA ATCCTGTATT TGTTCATAAA CAGTTAAGGG AATTTTTATT CGATAATGTA GACAGGATTA TTATGACCTC GGCAACTTTG TCTATAAATG GAAAGTTTGC TTATTTTAAA AACAGGGTGG GGCTTAGTCA AGATGCCCAA ACATATCAAA TAGAATCTCC ATTTAACTAT CAAGAACAAT CCAATATATA TATTCCTAAG AATTTTCCAG AACCCAGGTC AGGGGAGTAT AACAGGCAGT TAGCAGATAC CATTGAACAA ATTATCGATG CAGCTGGTGG AAGAACTTTA GTGTTATTTA CAAGCTATTC TACACTTAAT AGTATATATA ATCAGCTTAA AGATAAAGTC CCCTATGAAA TTTATTGTCA GGGGATTCAT CCAAAAAATA AAATTTTGTC TTGGTTTCAA AACGATGCCA GTTCCGTTCT CATGGCTACT AATAGTTTTA GAGAAGGTGT AGACGTACCC GGTAGTTCAC TGCAAGTAGT TATTATGGAT AAATTACCCT TTGCAGTACC CGATAATCCT TTAATAAAGG CTAAAATTGA AAAACTGCAA CAAGAAGGAC AAAATAGCTT TATGAACTAT CAGTTGCCAG AAGCTGTATT GGCTGTAAAG CAAGGGTTCG GTAGATTAAT AAGGCATAAT AATGACTGTG GAATCTTTGC CCTTCTGGAT CCTAGAGTTT TTACTAAATC TTATGGGCGT CACTTCATAA ATTCTCTCCC TAATGCACCC CTTATATCAA ATTGGTCGGA ATTAGAAGCT AAAATAAAAA CCTTACCTTA A
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Protein sequence | MSSQWEELDQ IWEDLQHHID KFETREGQID MSLGVLKALQ DGGHFVVEAG TGTGKSLAYL LPAVQLAQDE FRMVISTATI ALQEQLLQKD IPLVEKIIGR TLRVEVIKGR SNYLCKQKFN QHFGQTSFVN SIQERELIEW VNETETGDRN ELQTMPEIWE KVCSQSESCL AMRCQFYSEC FVVKLRKRAE TAELLVTNHH LYFSDLNLRI DSDGSMSIFP DYEGVIFDEA HHIPDTATKS LGREVKYSRV IKLFKEVTSY LKQKFQAQVN LVQEAEASAV KAFNKLSDFR ESDYLLRELD SFISLKEFRK KLSKLAQHVE ECALEEMDRP EQPRMLASRL NKTKLDLDLI LDLEEEDYIS WVNQQSSDIS LSTNPVFVHK QLREFLFDNV DRIIMTSATL SINGKFAYFK NRVGLSQDAQ TYQIESPFNY QEQSNIYIPK NFPEPRSGEY NRQLADTIEQ IIDAAGGRTL VLFTSYSTLN SIYNQLKDKV PYEIYCQGIH PKNKILSWFQ NDASSVLMAT NSFREGVDVP GSSLQVVIMD KLPFAVPDNP LIKAKIEKLQ QEGQNSFMNY QLPEAVLAVK QGFGRLIRHN NDCGIFALLD PRVFTKSYGR HFINSLPNAP LISNWSELEA KIKTLP
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