Gene Nther_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1060 
Symbol 
ID6314527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1118772 
End bp1119389 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content28% 
IMG OID642643432 
Productleucine-rich repeat protein 
Protein accessionYP_001917232 
Protein GI188585687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0894682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAA TTTCTGGCTG TAGTTCATCG GGACATGTTG AAAATGAAAA AATAATTTTC 
GAAGACAGTG AATTTGAAAA AACAGTAAAG GTGAGTTTAG GATATTTTGA GGATAATGCG
GTTTTGCCTA AAGCGGATGA TGATAAAGAA ATATATCTTT CGGATCTAAA AGATATCGAA
AAATTATCAG TCCATCCTAA ATATAATGAA ATAGAAAACA TAGCTGGAAT AGAGCATATG
GAAAACTTGA AGGTTCTAGA ATTAAACAGA ACAGAAGTAT CAAATATTGA TCCTTTGAAA
AGCTTAAGGA AACTTGAACA ACTTACCTTG AGGGATAATC AGATAGAAGA TATAAAAGCA
ATAGAAAACT TAAATAAATT AAGATTTTTA GATTTAGCTA ATAATAGTAT AGATAATATT
GACCCAGTTA AAAACCTTAA TAATTTAGAG GTTTTAAATT TGTCAAATAA TGAAATAAAT
GACATTACTC CGATAAAAGA ACTTGAACAT TTGGAAAAAG TTTATATGAA GAGTATAGAA
GAATTGCAAT CTGATCCTAA AAATATGGAA GTGATAGATT CATTGGAAGA CAGAGGTGTT
GAAGTTATTT GTGACTAA
 
Protein sequence
MALISGCSSS GHVENEKIIF EDSEFEKTVK VSLGYFEDNA VLPKADDDKE IYLSDLKDIE 
KLSVHPKYNE IENIAGIEHM ENLKVLELNR TEVSNIDPLK SLRKLEQLTL RDNQIEDIKA
IENLNKLRFL DLANNSIDNI DPVKNLNNLE VLNLSNNEIN DITPIKELEH LEKVYMKSIE
ELQSDPKNME VIDSLEDRGV EVICD