Gene Nther_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1025 
Symbol 
ID6314427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1095353 
End bp1095859 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content27% 
IMG OID642643397 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_001917197 
Protein GI188585652 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000320969 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.488495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA ATCCATTTGA ATTAGCCTAT AAAAAATACC ATAGAGAACT TTACTTCTAC 
GCCTTATCAC TTTGCAGACA CGAAGAATTA GCTAAAGATC TAGTAAGCGA AACTTTTTAT
AAAGCCTTCT TAACTTTAGA GACACCCGAT AATAATATAA AATTCTGGCT TTTTAGGGTT
TTAAAAAATT TATTTATTGA TTATCAACGA ACAAGCAAAT ATCATTTTTC ACTAGAAGAT
TATGAAATAA TTTTGGATAA TCAAAATCAA GATTCACCTT TGAAAAAAAT TATAAAAAAT
GAAAGGGATC ATGAAATATA CAAAAAAATA TTATCTCTCA CTCCTAATAA TTACCGTGAA
ATTATAATCC TCTATTATTA TGGAGGTTTA AGTATAAAAG AAATTGCTGT CACTTTGAAT
TCCAATCCTT CAACCATTAA AACAACTTTA CATAGAGCGC GAAAGAAACT AAAAAGACTG
ATGAAGGAGG ATATTTATGA GTTTTAA
 
Protein sequence
MKKNPFELAY KKYHRELYFY ALSLCRHEEL AKDLVSETFY KAFLTLETPD NNIKFWLFRV 
LKNLFIDYQR TSKYHFSLED YEIILDNQNQ DSPLKKIIKN ERDHEIYKKI LSLTPNNYRE
IIILYYYGGL SIKEIAVTLN SNPSTIKTTL HRARKKLKRL MKEDIYEF