Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0975 |
Symbol | |
ID | 6316864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1036857 |
End bp | 1038125 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642643347 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001917147 |
Protein GI | 188585602 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.171918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.086195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT GGTACAGTTT AATAGACAAG ATTTATTCCA AAAAGAATCT AGAAGACGCC TACCGCAGGG TCAGAGCTAA CAAAGGTAAA CCCGGCATAG ACCAGGTAAC CGTGGAGGCT TATGGCTCCA ACCTAGAAGA AAATCTGGAA ACCCTTCATC ATGACCTTAA AATTGGCGCA TACAAACCAC AACCTGTGAG GCGAGTTAAG ATACCCAAAC CAGATGGAAG TACTCGCCCA TTAGGGATTC CAACCGTAAA AGACAGGGTA GTCCAACAAG CAACCTTAAA TATACTTCAA CCGATTTTTG ATCCAGACTT CCACCCGTCA AGCTACGGAT ACAGGCCTAA TCGCTCATGT CACAAAGCAA TAGCTAAATC AGAACAGTTC ATTAATAAAT ACAATCTAAG ACATGTAGTA GATATGGACC TATCTAAATG CTTTGATAAA TTAAACCATG AGTTGATTAT CGAAGAAGTA GCCAAGAAAG TTAGTGATGG AAGTGTTCTC AAATTAATAA AGAAGTTTTT GAAGTCCGGA GTAATGGAAG ATGGAGCCAT AGAAGACACA GAAATAGGGA GCCCTCAAGG TGGAGTGATA TCACCACTAC TAACCAACAT TTACCTAGAC AGATTTGATA AAGAAATGAA GAGTCGCAAT ATCCGAATAG TAAGATATGC CGATGATATT TTAATATTCG CCTACACACC AAGACAAGCG AAAAGATATA AAGATATAGC TACTGAAATA TTAGAAGACG AATTAAAACT AACAGTTAAT AAAGAGAAAA CTCACATAAC AAATGACCGC AAAGGTGTTC CCTACCTAGG AGTTATCATA AGGAGTCAAA ACATATCCAT CCAGCCTGAA AAGATACAGA AATTCAAAGA AAAAGTCAGA ACTCTTACAC CAAGAAATCA TGGTAGAAAT CTATCCGAAA TCATAAAAGA GCTAAATCCA GTATTAAGAG GATGGGCAAA TTACTTCCGA ATAGCCAATT GTAAGAAACA ATTTGAGAAC TTAATGAAAT GGATTAGAAG AAGACTTAGG ATGAAGAAAA TGCGAGAATG GAAAAGTTGG AAACAACTAC ACAAAACTCT TCGCAGAAAA GGCTACAAAG GGGAATTTGA GAAAATCTCC ATGAATAAAT GGAGAAACTC ATCAAGTCCT CTCATAAGTT TAGCACTACC CAATAAGTGG TTTGACGAGA TAGGTCTAAT TAATATTAGT ACCTATCAAG TTGGTATTTT GCATCACTTT AGAAAGTGA
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Protein sequence | MKKWYSLIDK IYSKKNLEDA YRRVRANKGK PGIDQVTVEA YGSNLEENLE TLHHDLKIGA YKPQPVRRVK IPKPDGSTRP LGIPTVKDRV VQQATLNILQ PIFDPDFHPS SYGYRPNRSC HKAIAKSEQF INKYNLRHVV DMDLSKCFDK LNHELIIEEV AKKVSDGSVL KLIKKFLKSG VMEDGAIEDT EIGSPQGGVI SPLLTNIYLD RFDKEMKSRN IRIVRYADDI LIFAYTPRQA KRYKDIATEI LEDELKLTVN KEKTHITNDR KGVPYLGVII RSQNISIQPE KIQKFKEKVR TLTPRNHGRN LSEIIKELNP VLRGWANYFR IANCKKQFEN LMKWIRRRLR MKKMREWKSW KQLHKTLRRK GYKGEFEKIS MNKWRNSSSP LISLALPNKW FDEIGLINIS TYQVGILHHF RK
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